Gene Information

Name : insC (PSTAB_0104)
Accession : YP_004712474.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 118976 - 119281 bp
Length : 306 bp
Strand : -
Note : -

DNA sequence :
ATGGTGCGCGAGAGCCTTGAGCCCGGGCACAGCGTCTCAGTGGTCGCCCGACGCCACGGCATCAACCCCAACCAGCTGTT
TCATTGGCGCAAGCTCTATCAGGATGGCAGCCTGTCGGCAGTGAGCGCCGGAGAGGCCGTAGTTCCGGCTTCGGAGCTGG
CCGATGCGATGAAGCAAATCCGCGAACTGCAACGAATGCTGGGCAAGAAGACTATGGAAGCGGAGGTGCTCAAGGAAGCT
GTGGAGATCGCCCGTTCGCGAAAATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGACCAGTGA

Protein sequence :
MVRESLEPGHSVSVVARRHGINPNQLFHWRKLYQDGSLSAVSAGEAVVPASELADAMKQIRELQRMLGKKTMEAEVLKEA
VEIARSRKWIAHSPLLPGDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 5e-33 71
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 5e-33 71
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 4e-33 71
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 4e-33 71
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 4e-33 71
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 5e-33 71
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 3e-33 71
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 4e-33 71
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-28 70
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 1e-28 70
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-28 70
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-32 70
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-32 70
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-32 70
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 8e-21 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insC YP_004712474.1 putative transposase VFG0648 Protein 1e-33 71
insC YP_004712474.1 putative transposase VFG0622 Protein 4e-33 70
insC YP_004712474.1 putative transposase VFG0609 Protein 4e-33 70