Gene Information

Name : EGYY_08980 (EGYY_08980)
Accession : YP_004710488.1
Strain : Eggerthella sp. YY7918
Genome accession: NC_015738
Putative virulence/resistance : Virulence
Product : putative nucleoside-diphosphate sugar epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 982226 - 984058 bp
Length : 1833 bp
Strand : +
Note : -

DNA sequence :
ATGGATTTGCATATCGCCAAGCGAACAGCACTTCTTTTGCTGCTGGACATAGTGGCGACGTATGCCGCATATTGGCTGGC
TTCCTTGCTTACCGATGTATATCGCGAAGTGTTTGTCAACAACGAGATTTACTTCATATTGGGTATCCTAGCCCTATTTA
ATGTAATCGGCCTTGCGTTGTTCCGGATGTACAACAACTTATGGGAATATGCGAGTATCGATGAGGCTATCCAAATTCTT
TTGGCAGTAGTGCTCTCTACGTTGGCTGGGGCTGTGTTTTTGTGGATCATTGACGTGCGACTTCCCATTCGCGTGTTCAT
TGCTTCCGCTATCTTGCTGGTGTTTCTTATGGGTGGCGTGCGTATGGTATGGCGCATTATGCGCGGAAAGCGTCATCAGA
TTGCTGCGGGCGCTCCGACGGATCGACCGCGTACGCTTATTGTAGGGGCGGGAGAGACGGGTTCGCTCACTATCAATCGT
ATGGCTTCGAAAGACCCCAATATGCCAGGGATCCCGGTGGTCGCAACAGACGATGATCCTGTAAAGCGAGGTTTGCGTAT
TCATGGAATCAAGGTTGCGGGGTCAAGCGACGATATTATCTCCCTTGTTGACCGCTACGACATTGAGCAAATTGTCGTAG
CCATTCCATCTGCAACCTCCGAAGAACGCAAACGTATTTATGCGGTATGCACGCAAACGAACTGCAGCCTCAAAACACTC
CCGAACATTCGCGATTTGTGCATTGACGAGTTGGGCGATGTGGCGTTTCGCGATGTTGATGTTGTCGACCTACTCGGCCG
TGAAGAGATTGTGCTTGATACGCGTATTGCCTCAAGCTATATCGCGGGCGAAACGGTGCTGGTGACGGGTGGCGGCGGCT
CTATCGGCAGTGAGTTGTGTCGGCAGCTGGCGAAGGTTGCGCCCGCGTGTATTGTCATCTTCGATATCTACGAAAATGAT
GCGTATATGTTGCGTCAGGAATTGATATCTGAATACGACGATATCGACGTGGTGATAGAGGTGGGGAGCGTTTGTGACAC
GTCGCGCGTAAAAGAGCTGTTTGAGCGCTATCGGCCTGCTGCGGTGTTTCATGCGGCTGCGCATAAGCACGTTCCGTTGA
TGGAGCAGTGCCCGCGTGAGGCGGTGCAGAACAACGTGTTCGGGACGTTGAACGTGGTGAGAGCGGCCGATGCGTTCGGA
GTCGAGCGTTTTATTTTCATTTCGACCGACAAAGCGGTGAATCCCACCAGTGTCATGGGAGCCACAAAGCGCATGGGAGA
AATGATCGTGCAGTACTATGCACGCGCCTCGAAGACAGTCTTTTCGGCCGTGCGTTTTGGCAACGTTTTGGGGAGTAATG
GTAGCGTGATCCCACTGTTCAAAAAGCAGATTGCCGCGGGTGGACCCATTACGGTGACACATCCTGATATCGAACGGTTT
TTTATGACCATCCCCGAAGCAACGCGACTCGTTATTCAGGCGGGTGGCATGGCACACGGTGGCGAGATTTTCATTCTCGA
CATGGGCGAGCCGGTAAAAATTTTGGACTTAGCGAAAAACCTCATTCGCCTGTCAGGGGCTGATGTCAAAATCTTATTCA
CGGGTTTACGTGACGGTGAGAAGATGTACGAAGAGCTGCTCATGGACGAGGAAACAACGCTGCCGACCAGCAACCAATCT
ATTTTGATTTCGCAGGGCCAGGAGATAAGCTACGAAGAAGTAGCTGCCAAACTTGAAGAGTTAGAGGCTGCTATCGCTTG
CTGCGACGACGAGGCGATTCGCATTCTAGAAGAAGCCGTACCAACTTACAGGCACACTGTGAATTGCGATTAG

Protein sequence :
MDLHIAKRTALLLLLDIVATYAAYWLASLLTDVYREVFVNNEIYFILGILALFNVIGLALFRMYNNLWEYASIDEAIQIL
LAVVLSTLAGAVFLWIIDVRLPIRVFIASAILLVFLMGGVRMVWRIMRGKRHQIAAGAPTDRPRTLIVGAGETGSLTINR
MASKDPNMPGIPVVATDDDPVKRGLRIHGIKVAGSSDDIISLVDRYDIEQIVVAIPSATSEERKRIYAVCTQTNCSLKTL
PNIRDLCIDELGDVAFRDVDVVDLLGREEIVLDTRIASSYIAGETVLVTGGGGSIGSELCRQLAKVAPACIVIFDIYEND
AYMLRQELISEYDDIDVVIEVGSVCDTSRVKELFERYRPAAVFHAAAHKHVPLMEQCPREAVQNNVFGTLNVVRAADAFG
VERFIFISTDKAVNPTSVMGATKRMGEMIVQYYARASKTVFSAVRFGNVLGSNGSVIPLFKKQIAAGGPITVTHPDIERF
FMTIPEATRLVIQAGGMAHGGEIFILDMGEPVKILDLAKNLIRLSGADVKILFTGLRDGEKMYEELLMDEETTLPTSNQS
ILISQGQEISYEEVAAKLEELEAAIACCDDEAIRILEEAVPTYRHTVNCD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 9e-89 48
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-87 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EGYY_08980 YP_004710488.1 putative nucleoside-diphosphate sugar epimerase VFG1300 Protein 1e-89 47