Gene Information

Name : ClpA (EGYY_07880)
Accession : YP_004710385.1
Strain : Eggerthella sp. YY7918
Genome accession: NC_015738
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 856037 - 858601 bp
Length : 2565 bp
Strand : +
Note : -

DNA sequence :
ATGTCATTTGAGAAATTTACCGACAAGGCCCGCAAGGTCCTTGTTTTAGCTCAGGACGAAGCGCGTTCCCTGCATCAGCC
CTACGTGGGCACCGAGCACATCCTGCTCGGTCTCATCCAGGAAAAGGACGGCCTAGCCGCCCAAGCGCTCGATCGCCTGA
ACGTCAAGTACGACGGCGTGGTGCAAGCCATCCGTCAGGTGGTCACCATCGATGAGGATACCGATGTCTCTGGGCATCTC
TCCTTCACTCCACGCGTGAAGCGCGTACTGGAGAACAGCCTGCGTGAGGCTATGCAGATGGGCCAATCCTATATTTCCAC
CGAGCATTTATTGCTTGGTATCGTGCGCGAGGGCGACGGCACGGCGCTTGAGGTGCTTACGCGTCTCGGCGTTTCCGGCG
ATGATGTGCGCAGTGCGCTCAACGACCTGGTGGGACAGAGCCCGGTGTATGCCGGACGCAACCCGTTCGATCCGAACGCG
GGTTCTTCCGACAGCGTGCTGAAGGAATTTGGCACAGATCTTACGCAGAAGGCGCGCGACGGCAAACTCGATCCGGTTAT
CGGTCGTGCAGGCGAAATCGAGCGCGTCATGCAGGTGCTCTCCCGTCGCCAGAAGAACAACCCGCTGCTTATCGGCGAGC
CCGGCGTGGGCAAGACCGCCGTGGTGGAGGGCTTGGCTCAGCTGATCGTGTCGAATCAGGTGCCCGACATCCTGCGCGGC
AAGCGTTTGTTCACGCTCGACGTGAGCGCGCTCGTGGCGGGCTCCAAGTACCGCGGCGAATTCGAAGAGCGCCTGAAGAA
GTGCATCAAAGAAGTGATGGATGCCAAAGACATCATCCTGTTCATCGACGAGATGCACACGCTCATCGGCGCGGGATCGG
CCGAAGGTTCCATCGATGCTGCCGCCATCCTGAAGCCGCCGCTGTCCCGCGGTGAGATTCAGGTGATCGGCGCTACCACC
ATCGACGAATACCGCAAGCACCTTGAGAAGGATTCGGCGCTTGAGCGTCGCTTCCAGCCTATCACGGTGGGCGAGCCCAA
TGAGGAACAGGCCATGCGCATCATGGAGGGTCTGCGTGATCGCTACGAGGCGCACCATCAGGTGCACTTCACCGACGACG
CGCTGCATGCTGCGGTGTCGTTGTCGAACCGCTATATTCAAGATCGTTTCCTGCCTGACAAGGCTATCGACGTGCTTGAC
GAGGCGGGGGCGCGCATGCGCATTCGCAACATGACGCTGCCCAAAGAACTGCGTGAACTTGATGACGAGCTGCGCAAGCT
TCGCAGCGAAAAAGACACCGCCATCGGTGCTCAGGATTTCGAGCGCGCCGCCCAGCTGCGCGACCAGGAGTCTGAGCTCA
AAAAGAAGCGCGAAGAGGCCGAAAAGAAGTGGGAAGAGGACGCTCAGAAGTCCATCCATCAGGTAACGGTGGAAGACATT
GCCGACGTCGTATCCATGTCCACTGGCGTGCCGGTTTCCAACCTCACCGAGGCCGAGACCGAAAAGCTGTTGCGTATGGA
AGCCGTGCTGCACGAGCGCGTTGTTGGTCAGGAGGAAGCGGTTACCGCGCTTTCGAAGGCTATCCGTCGTTCGCGCTCGG
GGTTGAAAGACCCGAAGCGTCCTGCCGGTTCGTTCATCTTCCTGGGCCCCTCGGGCGTGGGTAAGACCGAACTTTCCAAG
GCGCTTGCCGAGTTCTTGTTCAATTCCGAGGATGCATTGCTTTCCTTCGACATGTCCGAGTACATGGAGAAGCATAGCGT
GTCGCGCCTGGTGGGTTCGCCTCCGGGCTACGTGGGCTTCGACGAGGGCGGCCAGCTGACCAAGGCCGTGCGCCAGCGTC
CCTACTCGGTTGTGCTGTTCGACGAGATCGAGAAGGCGCATCCCGATGTATTCAACATCCTGCTCCAGATTTTGGAGGAA
GGGCGTTTGACCGACGCGCAGGGTCGCACGGTGGACTTCCGCAACGCGGTCATCATCATGACATCGAATGTGGGTGCCCG
CGAAATCGCCCAGCCCACCACGCTCGGCTTCTCGGCCGAGGAACATACCGGCCTCTCCGACAAGGAGATCAAGAGTCGCG
TTATGGCCGAGATGAAAAAGCTGTTCCGTCCCGAGTTCTTGAACCGTATCGACGAGATCATCGTGTTCAAGTCCCTCACC
GATGAGCAGATTGCCGAAATCGTGAAGCTCATGGTGGCCGATCTGCGCGAGCGCTTGATCGCCCAGAACATGTCCATCAA
CCTGACCGAGGCAGCTTGCAAGCTCATCGCGAAGGAAGGCACCGATGCCACGTTTGGCGCGCGCCCGCTGCGTCGTGCCA
TCCAGCGCCTGCTCGAAGATCCTTTGTCCGAGGAGATTTTGGAAGGCAAGTGGGCAAGTGGCTCCATCATCGACGTGGAT
GCAGTGGATGGCGAGCTGGTGTTCACTCAGGGTTCAGGCGCTATTCCTGAGCCGCGGAAGCGTGACAACATAGCGCGAGA
AGCCGAACTGCTGCTGACAAACTACGATCTGGGCCATGCTGGCGTGCGTGGCGGCGGATCGACGGCTGGCGGAGCGGCGG
ACTAG

Protein sequence :
MSFEKFTDKARKVLVLAQDEARSLHQPYVGTEHILLGLIQEKDGLAAQALDRLNVKYDGVVQAIRQVVTIDEDTDVSGHL
SFTPRVKRVLENSLREAMQMGQSYISTEHLLLGIVREGDGTALEVLTRLGVSGDDVRSALNDLVGQSPVYAGRNPFDPNA
GSSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLSRRQKNNPLLIGEPGVGKTAVVEGLAQLIVSNQVPDILRG
KRLFTLDVSALVAGSKYRGEFEERLKKCIKEVMDAKDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATT
IDEYRKHLEKDSALERRFQPITVGEPNEEQAMRIMEGLRDRYEAHHQVHFTDDALHAAVSLSNRYIQDRFLPDKAIDVLD
EAGARMRIRNMTLPKELRELDDELRKLRSEKDTAIGAQDFERAAQLRDQESELKKKREEAEKKWEEDAQKSIHQVTVEDI
ADVVSMSTGVPVSNLTEAETEKLLRMEAVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVGKTELSK
ALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVVLFDEIEKAHPDVFNILLQILEE
GRLTDAQGRTVDFRNAVIIMTSNVGAREIAQPTTLGFSAEEHTGLSDKEIKSRVMAEMKKLFRPEFLNRIDEIIVFKSLT
DEQIAEIVKLMVADLRERLIAQNMSINLTEAACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEEILEGKWASGSIIDVD
AVDGELVFTQGSGAIPEPRKRDNIAREAELLLTNYDLGHAGVRGGGSTAGGAAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ClpA YP_004710385.1 chaperone ATPase VFG0079 Protein 0.0 56
ClpA YP_004710385.1 chaperone ATPase VFG0080 Protein 5e-155 51