Gene Information

Name : OmpR (EGYY_03260)
Accession : YP_004709960.1
Strain : Eggerthella sp. YY7918
Genome accession: NC_015738
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 357297 - 357992 bp
Length : 696 bp
Strand : -
Note : consisting of a CheY-like receiver domain,winged-helix DNA-binding domain

DNA sequence : 
ATGAACGACACGCCGCATCGTATTCTCGTCGTCGACGACGAGCCATCTATCACTGAATTTGTGAGCTATGCGCTCAAAAA
AGAGGGTTTCTACACCGATGTCGTCGACAATGGCGAAGACGCGCTCGAGCTGGCCACAAAGAACCCCTACGATTTGTTCG
TGCTCGACATCATGCTTCCCGGAATGGATGGATACGAACTCTGCCGCCGTCTGCGCTCAAAGACCTCTGTGCCGGTGTTG
TTCCTTTCGGCACGTGACACCGAGCTTGATAAAGTGGTCGGCCTTGAGATCGGTGGCGACGACTATCTGGCCAAACCGTT
CGGCGTTCGTGAGCTTATCGCACGCGTGCGCGCCCTTCTGCGACGCGGTTCGGGTGGCGATTTCCCCGGCGCCAACCACG
CCGTCACGGCAAGCGGCATCACGTTGGACGAAGATGCCCACACGGCAAGTGGCGCAAACGGAGAAATCGATTTGACGCCG
CGCGAATTCGAACTGCTTGCAAGCTTGATGAAGAGCGCGGGCAAGGTGGTGTCTCGCGAAGATTTGCTGCGCGACGCGTG
GGGTTGGGAATACTTGACAGAAACCAAGACCGTCGACACCCACATCAAACGCCTGCGTGATAAGATTGAATCGGCCGGAT
ACGACCCCGGCTTGGTAGAAACGGTTCGCGGATACGGATATAGGTTCAGGCAATAA

Protein sequence : 
MNDTPHRILVVDDEPSITEFVSYALKKEGFYTDVVDNGEDALELATKNPYDLFVLDIMLPGMDGYELCRRLRSKTSVPVL
FLSARDTELDKVVGLEIGGDDYLAKPFGVRELIARVRALLRRGSGGDFPGANHAVTASGITLDEDAHTASGANGEIDLTP
REFELLASLMKSAGKVVSREDLLRDAWGWEYLTETKTVDTHIKRLRDKIESAGYDPGLVETVRGYGYRFRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OmpR YP_004709960.1 response regulator NC_012469.1.7686381. Protein 4e-48 45
OmpR YP_004709960.1 response regulator NC_012469.1.7685629. Protein 3e-43 44
OmpR YP_004709960.1 response regulator AE016830.1.gene1681. Protein 1e-47 43
OmpR YP_004709960.1 response regulator HE999704.1.gene2815. Protein 1e-44 43
OmpR YP_004709960.1 response regulator BAC0197 Protein 3e-40 43
OmpR YP_004709960.1 response regulator BAC0347 Protein 4e-34 41
OmpR YP_004709960.1 response regulator BAC0308 Protein 5e-37 41
OmpR YP_004709960.1 response regulator BAC0083 Protein 2e-40 41
OmpR YP_004709960.1 response regulator BAC0125 Protein 1e-39 41
OmpR YP_004709960.1 response regulator NC_002952.2859905.p0 Protein 1e-44 41
OmpR YP_004709960.1 response regulator NC_003923.1003749.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator BAC0638 Protein 7e-34 41
OmpR YP_004709960.1 response regulator NC_002758.1121668.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator NC_009641.5332272.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator NC_013450.8614421.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator NC_007793.3914279.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator NC_007622.3794472.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator NC_002745.1124361.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator AE000516.2.gene3505. Protein 5e-39 41
OmpR YP_004709960.1 response regulator NC_009782.5559369.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator NC_002951.3237708.p0 Protein 2e-44 41
OmpR YP_004709960.1 response regulator AF155139.2.orf0.gene Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OmpR YP_004709960.1 response regulator VFG1389 Protein 1e-30 42
OmpR YP_004709960.1 response regulator VFG0596 Protein 2e-36 41
OmpR YP_004709960.1 response regulator VFG1386 Protein 1e-36 41