Gene Information

Name : CXIVA_06100 (CXIVA_06100)
Accession : YP_004707679.1
Strain : Clostridium sp. SY8519
Genome accession: NC_015737
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 651205 - 652725 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGTGTGAGAAAGGGCTTAGTATTATGGCAGTATTACCAAAAGTAAATTTAAAACCAGAGTATCAGTTATTTATCAACGG
ACAGTGGAAACCCGCATCTGACGGCGCGACCTTTGATACATTTTGTCCGGCAAACGGTGAGAAGCTGGCAAGCTGCGCAG
AAGCTACCAGAGAAGATGTGGATGAAGCGGTAAAAGGCGCCTGGGAAGCCTTCAAATCCTGGAAACAGACTACAGTACAG
GAAAGAGCGGCAATCCTGAATAAAATCGCGGATATTATAGATGAAAACGCAGAAGAACTTGCGCTGATTGAGACACTGGA
CAACGGAAAACCGATCCGGGAGACCAAAGCAATTGATGTTCCCATGTCTGCAGACCATTTCCGGTATTTTGCGGGAGCCA
TTCTCGCGGATGAGGGCAGCGCAAATATGCTGGGCAAGGATACCCTGAGCCTGATTCTCCGTGAGCCCATCGGTGTAGTC
GGTCAGATTGTTCCGTGGAACTTTCCGTTTCTGATGGCTGCCTGGAAACTGGCTCCGGTTCTGGCTTCCGGCTGCTGTAC
GGTAATCAAATCCTCCAGCTCCACACCGTTAAGTCTTCTGAGACTGGCAGAGCTGATTCAGGACGTGGTGCCGGCAGGCG
TATTCAATGTAATTACCGGCGCAGGCTCCAAATCCGGCCAGTATATTCTGGATCATCCGGGCTTCGCGAAACTGGCATTT
ACCGGATCGACGGAAGTGGGACTGAATGTAGCCAAAGCGGCAGCAGACAAGCTGATTCCCGCAACTCTGGAACTAGGCGG
AAAATCCGCAAATATTTTCTTCAGCGACTGCAACTGGGAGCAGGCCATGGACGGCCTTCAGTTAGGCATTCTGTTTAATC
AGGGCCAGGTATGCTGTGCAGGTTCCCGTGTATTTGTACAGGAAGACATTTATGACAAGTTTGTAGCAGAGGCAGTGAAA
CGGTTTAACAGTGTGAAAATCGGCATGCCCTGGGAAGAAGATACCCAGCTGGGCGCCTCTATTTACAAACGTCAGCTTGA
AAAAGTCCTGGGTTATATCGATATCGCGAAACAGGAAGGCGCAGAGATTGCATGCGGCGGAGAAGCTGCGACAGAAGGGG
ATCTGGCAGACGGATATTTCATGAAACCTACGCTGATCACCAATGTGACCAACGATATGCGTGTGGCACAGGAAGAGATC
TTCGGACCGGTGGCAGTCGTAATCAAATTCAAAGATGAAGAAGATGTGATTGCCATGGCCAATGACAGTGAATACGGCCT
GGGCGGCGCTGTGTGGACACAGGATATCAACCGTGCCATCAAAGTGGCAAGAGCCATTGAGACCGGCCGTATGTGGGTCA
ATACCTATAATGCGATTCCGGAAGGCGCTCCCTTCGGCGGATACAAGAAATCCGGCATCGGACGTGAGACTCATAAAGTA
ATGCTGGAGCATTATACACAGATGAAGAATATCATGATCAATCTGTCCGGTCAGCCCAGCGGTTTTTACCCGAAAAAATA
G

Protein sequence :
MCEKGLSIMAVLPKVNLKPEYQLFINGQWKPASDGATFDTFCPANGEKLASCAEATREDVDEAVKGAWEAFKSWKQTTVQ
ERAAILNKIADIIDENAEELALIETLDNGKPIRETKAIDVPMSADHFRYFAGAILADEGSANMLGKDTLSLILREPIGVV
GQIVPWNFPFLMAAWKLAPVLASGCCTVIKSSSSTPLSLLRLAELIQDVVPAGVFNVITGAGSKSGQYILDHPGFAKLAF
TGSTEVGLNVAKAAADKLIPATLELGGKSANIFFSDCNWEQAMDGLQLGILFNQGQVCCAGSRVFVQEDIYDKFVAEAVK
RFNSVKIGMPWEEDTQLGASIYKRQLEKVLGYIDIAKQEGAEIACGGEAATEGDLADGYFMKPTLITNVTNDMRVAQEEI
FGPVAVVIKFKDEEDVIAMANDSEYGLGGAVWTQDINRAIKVARAIETGRMWVNTYNAIPEGAPFGGYKKSGIGRETHKV
MLEHYTQMKNIMINLSGQPSGFYPKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-101 50
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-106 50
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-106 50
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-106 50
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-106 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CXIVA_06100 YP_004707679.1 hypothetical protein VFG0082 Protein 7e-102 50