Gene Information

Name : HypB (CXIVA_25570)
Accession : YP_004709628.1
Strain : Clostridium sp. SY8519
Genome accession: NC_015737
Putative virulence/resistance : Virulence
Product : Ni2+-binding GTPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0378
EC number : -
Position : 2775857 - 2776465 bp
Length : 609 bp
Strand : -
Note : involved in regulation of expression; maturation of urease and hydrogenase

DNA sequence : 
ATGTCATATGTAAAAATCGGTGTGGCCGGTCCTGTGGGTTCGGGGAAAACAGCCCTGATCGAAGCCCTGACCAGAGAGAT
GGCAAAGGATTACAGTATCGGAGTCATAACCAATGATATTTATACCAAGGAAGACGCGGAGTTCCTGAGTAAAAACAGTG
TCCTTCCGATGGAACGGATCATCGGTGTGGAGACCGGGGGCTGCCCCCATACGGCCATCCGCGAAGATGCCTCCATGAAT
CTGGAGGCCGTGGATGAAATGATGGAGCGTTTTCCGGATATTGAACTGCTTTTTATCGAAAGCGGCGGAGACAACCTTTC
CGCAACCTTCAGTCCGGAACTGGTGGAGGCGACCATCTTTGTCATTGATGTGGCGGAAGGCGACAAAATTCCACGGAAAG
GCGGTCCGGGCATTACCCGTTCCGACCTGCTGGTGATCAACAAGATTGACCTGGCTCCTTATGTAGGCGCGGACTTGGGC
GTGATGGAGCGGGATTCCAGAAAGATGCGGGGCGACCGTCCGTTCCTTTTTACTAATATCCGTGACAGAGAAGGTGTGGA
TCAGGTCATTCGGTGGATCAAGGAAAACGTTCTGTTAGAGGGGTGCTGA

Protein sequence : 
MSYVKIGVAGPVGSGKTALIEALTREMAKDYSIGVITNDIYTKEDAEFLSKNSVLPMERIIGVETGGCPHTAIREDASMN
LEAVDEMMERFPDIELLFIESGGDNLSATFSPELVEATIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLG
VMERDSRKMRGDRPFLFTNIRDREGVDQVIRWIKENVLLEGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureG YP_005682171.1 urease accessory protein UreG Not tested PiCp 7 Protein 5e-60 66
ureG YP_005684263.1 urease accessory protein UreG Not tested PiCp 7 Protein 5e-60 66
ureG YP_003784322.1 urease accessory protein Not tested PiCp 7 Protein 5e-60 66
ureG YP_005686355.1 urease accessory protein UreG Not tested PiCp 7 Protein 5e-60 66
ureG NP_286683.1 urease accessory protein G Virulence TAI Protein 1e-54 65
ureG_2 NP_287091.1 urease accessory protein G Not tested TAI Protein 1e-54 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HypB YP_004709628.1 Ni2+-binding GTPase VFG0274 Protein 9e-77 84