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Name : CXIVA_25490 (CXIVA_25490) Accession : YP_004709620.1 Strain : Clostridium sp. SY8519 Genome accession: NC_015737 Putative virulence/resistance : Virulence Product : putative nucleoside-diphosphate sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2766786 - 2768744 bp Length : 1959 bp Strand : - Note : - DNA sequence : ATGAGTGAAAATGCAAAGAAAATAAAAAAAAGGCTGGAACACTGGGAAGTGGTATCCTTGCTGCTGGCAGTCTATGATTT CCTGGCAGTGACAGTATCCTACTTTGCGGCCTTATGGATCCGGTTTGACTGCAGTTTCAACCTGATTGAACATGACTATC TGCATGCCTATTATCGGACGATCCTCATATACGCAGGATGCTGCATCATCGTTTTCTGGCTGACACGACTTTACAAAAGC ATCTGGCGCTTTGCCAGCTATTCGGAACTGATGCGGATGATTCTTGCCACAGTCATTACGGGCGCGTCCTATGCCGCATG CATGTCAGGCTTTGTCCGCAGAATGCCTGTTTCCTATTTCGTCTTCGGCATTATCATTCAGTTTGTCCTGACCCTGGGAA TCCGCTTCTCCTACCGGTTTATTCTGCTTCTGCGGGCCAGGAGAAATGAAGATGAAGCGGGAAAGAATGTGATGCTCATC GGGGCAGGCGCGGCAGGGCAGATGATCTTCCGGGACATCAGACGTTCCCGGGAAACCAGTGAAACGGTCTGCTGCTTTAT CGACGACAATCCGAACAAATGGGGCAGATACATCGACAATGTCCCGGTCTTCGGCGGCAGAGAAAGCATCCTGGAAGCCG TCCGGAAATTTGAAATTGAAAAAATATATGTCGCCATTCCGAGCGCCGCGCCGAAAGACAAACGGGAAATCCTCCGCATC TGCAATGAAACCTCCTGCGAATTGATGAATCTTCCCGGCATGTATCAGATCTACACCGGACAGGTCTCCATCAGCAAAAT GAAGCCGGTACAGATCGAGGATCTGTTAGGCAGGGATCCGATCCGCCCGGACATGAAAGAGGTATTTAAGTACATCACCG GCAAGGTGGTACTGATTACGGGCGTGGGTTCCATCGGATCCGAGCTGGCCAGACAGATCGCCTCCCATCACCCGAAGCAT CTGATCCTTTTTGATGTCTACGAAAACAATGCCTATGAAGTACAGCAGGAGCTGAAGAAAAAATATCCGGACTTAGAACT GGATACCATCATCGGCTCTGTCCGGGACAGCAGAAAAGTATTCCAGCTCTTTGAGAAGTTCCGTCCGGAAATCGTCTACC ATGCGGCAGCCCACAAGCACGTACCGCTGATGGAAGACAGCCCGTGTGAAGCAATCAAGAACAATGCCATTGGTACCTAC AAAACCGCGTATGCCGCCATGGCGCACGGATGCAAACGATTTGTGCTGATCAGCACAGACAAGGCAGTGAATCCCACCAA CATCATGGGGGCATCCAAACGTCTCTGCGAAATGATCATTCAGGCCTTCGACGCAAAGATCAAAGAAGGAAAAGCATATG AAATCCCGCAGCTGTTTACCCATGGCGTAAAGGACGCGATGACAGCACCGGAAGTCATCGAGGCATTAAAGAAAACCAGT ACAGAATTCGTAGCCGTACGATTCGGCAATGTGCTGGGCAGCAACGGTTCCGTTATTCCGCTTTTTAAAAAGCAGATCGC GGCAGGCGGCCCGGTTACCGTCACACATCCGGACATCATCCGCTACTTCATGACCATCCCGGAGGCCGTAAGTCTGGTGC TTCTTGCAGGAACTTATGCAAAAGGCGGAGAAATCTTTGTGCTGGACATGGGAGAACCTGTTAAAATAGATACGCTGGCC CGGAATCTGATCCGGCTGTCCGGCTATACGCCGGACGTGGATATCAAAATTGAATTCACAGGACTTCGGAAGGGGGAAAA ACTCTTCGAGGAGAAATTAATGGCGGAAGAAGGACTGCGGAAGACAAAAAATGAGTTAATCCACATCGGCTGTCCGATTC CTTTTGACATCAATGAATTCCTGGGACAGCTGGAAGGGCTGCTGAATGCTGCATACAAAAACAAGGATGATATGAGGGAA CGTGTGCAGAAGGTGGTTGTGACGTATCATCCGGCGTAG Protein sequence : MSENAKKIKKRLEHWEVVSLLLAVYDFLAVTVSYFAALWIRFDCSFNLIEHDYLHAYYRTILIYAGCCIIVFWLTRLYKS IWRFASYSELMRMILATVITGASYAACMSGFVRRMPVSYFVFGIIIQFVLTLGIRFSYRFILLLRARRNEDEAGKNVMLI GAGAAGQMIFRDIRRSRETSETVCCFIDDNPNKWGRYIDNVPVFGGRESILEAVRKFEIEKIYVAIPSAAPKDKREILRI CNETSCELMNLPGMYQIYTGQVSISKMKPVQIEDLLGRDPIRPDMKEVFKYITGKVVLITGVGSIGSELARQIASHHPKH LILFDVYENNAYEVQQELKKKYPDLELDTIIGSVRDSRKVFQLFEKFRPEIVYHAAAHKHVPLMEDSPCEAIKNNAIGTY KTAYAAMAHGCKRFVLISTDKAVNPTNIMGASKRLCEMIIQAFDAKIKEGKAYEIPQLFTHGVKDAMTAPEVIEALKKTS TEFVAVRFGNVLGSNGSVIPLFKKQIAAGGPVTVTHPDIIRYFMTIPEAVSLVLLAGTYAKGGEIFVLDMGEPVKIDTLA RNLIRLSGYTPDVDIKIEFTGLRKGEKLFEEKLMAEEGLRKTKNELIHIGCPIPFDINEFLGQLEGLLNAAYKNKDDMRE RVQKVVVTYHPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-80 | 44 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-79 | 44 |
