Gene Information

Name : PhnL (CXIVA_21980)
Accession : YP_004709267.1
Strain : Clostridium sp. SY8519
Genome accession: NC_015737
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2402652 - 2403341 bp
Length : 690 bp
Strand : -
Note : involved in lipoprotein release, ATPase component

DNA sequence : 
ATGAACACCAGAACACCAATGATCGAACTGAATCATATCTGTAAATATTATCAGATCGGAGAAACACAGGTACGCGCCTT
GGACGAGGCGTCTCTTACGATCCGGGCAGGAGAATTCGTTGGCATCATCGGTCCTTCCGGCAGCGGAAAATCTACGATGA
TGAATATCATCGGCTGTCTGGACACTCCGGATGACGGACAGTATATCTTAAACGGACAGCCCATTGAATCCTACAGCGAA
GCCGAACTGACCGCCATACGAAGCCGGCAGATCGGATTTATTTTCCAGAATTTTAACTTAATCGGCAATCTGACGGCGGA
AGAAAATGTGGAGCTTCCCATGATCTATCAGCGTCTGCCGAAAGCAGAGCGAAAAGAACGCACGGCCCGGGCCCTGGACC
GTGTCGGCCTTTCTGCCAGAGCCGGCCACAGACCGAACGAACTGTCCGGCGGCCAGCAGCAGCGTGTAGCCATTGCCCGG
GCGATTGCCACACAGCCTTCTTTATTTCTGGCTGATGAGCCGACGGGAAATCTGGATTCCAGAACAGGGGATGAAATTAT
GGATCTGTTTCACGAATTGCATGCCGCCGGCAATACCATTGTCATTATCACCCATGATGAAACGATCGCCAATCAGACCG
CCCGGCAAATCCGTATCCGGGACGGCCATGTAACGGAGGTGACTGCCTGA

Protein sequence : 
MNTRTPMIELNHICKYYQIGETQVRALDEASLTIRAGEFVGIIGPSGSGKSTMMNIIGCLDTPDDGQYILNGQPIESYSE
AELTAIRSRQIGFIFQNFNLIGNLTAEENVELPMIYQRLPKAERKERTARALDRVGLSARAGHRPNELSGGQQQRVAIAR
AIATQPSLFLADEPTGNLDSRTGDEIMDLFHELHAAGNTIVIITHDETIANQTARQIRIRDGHVTEVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PhnL YP_004709267.1 ABC transporter NC_008702.1.4606598. Protein 2e-45 51
PhnL YP_004709267.1 ABC transporter NC_012469.1.7686878. Protein 2e-48 49
PhnL YP_004709267.1 ABC transporter CP001581.1.gene798.p Protein 2e-33 46
PhnL YP_004709267.1 ABC transporter NC_012469.1.7686946. Protein 2e-24 43
PhnL YP_004709267.1 ABC transporter CP001581.1.gene598.p Protein 1e-31 42
PhnL YP_004709267.1 ABC transporter NC_012469.1.7685735. Protein 3e-31 41