Gene Information

Name : CXIVA_13380 (CXIVA_13380)
Accession : YP_004708406.1
Strain : Clostridium sp. SY8519
Genome accession: NC_015737
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1437156 - 1438910 bp
Length : 1755 bp
Strand : +
Note : -

DNA sequence :
ATGACAACATTTCGCAAAACAAAAATCATCTGCACGCTGGGTCCGGCAACTGATCAGGGAGATACCCTGAAGCAGCTTGC
ATTAAACGGCATGAATGTGGCCAGATTCAACTTTTCCCATGGCAGTCATGAGGAACAGGCGGAACGGTTTCAGAAGCTGG
TGGCAGTCCGGGAAGAGACCGGGCTCCCCATTGCTACGCTTCTGGATACCAAGGGACCGGAGATCCGGGTCAAAGATTTC
AAAGAGGGCGCGATCGAATTAAAGGAAGGACAGAAATTCACACTGTCCATCGGCGATTTTCTGGGAGATGAGAATCGTGT
GGCCATTTCATTTGAAGATCTGTACCAGGATGTGGAGCCCGGCAGCCGGATTCTGATTGATGACGGGCTGATCGAGATGC
ATGTGGATGAGATCTCCGGCACGGATATCATATGCACGGTTGACAACGGCGGCCCGGTGTCCAATCACAAAGGGGTCAAC
GTGCCGAATGCGGCGCTGTCCATGCCGTTTATCAGTGAGAAAGACCGTTCGGATATTGAATTCGGTATCCGCCAGGGCTT
CGATTTTATTGCGGCGTCGTTTACCCGGACAGCCGATGATATTCTGGAGATCCGCAAGATACTGGAGGATAACGGGGGCA
CGGAAATCCAGGTCATCGCGAAAATTGAGAACAAGCAGGGCGTGGACAACATCGACGATATCATCCGCGTCAGCGACGGC
GTGATGGTGGCCCGCGGAGATATGGGCGTGGAGATTCCCTTCGAGGATGTGCCGGCGATCCAGAAAAAGATCATCAAAAA
GACGTATACCGCCGGCAAGCAGGTAATTACCGCCACACAGATGCTGGATTCCATGATCAAGAATCCCCGTCCCACCAGGG
CGGAGACAGCCGATGTGGCAAACGCGGTATATGACGGCACCAGCGTCATCATGCTGTCCGGCGAGACGGCAGCCGGCCTG
TATCCGGTGGAGGCATTAAAGACCATGGTCCGCGTGGCCACCCGGACGGAGCAGGATATTGATTATGCCAAACGCCTGAA
AAACAGAGACCATACAGAGGAAAATGACATTACCAATGCCATTGCCCACGCAACCTGCACGACAGCGCTGGATCTGAATG
CCTCAGCGATTATTTCCGTCAGCAGTTCCGGCAGAACCGCGCGCATGGTATCCAAATACCGGCCCAGCTGCCCGATTATC
GGGTGTTCGACCTATGATCATGTATGCCGCCGGATGAATATGTCCTGGGGCGTGATTCCCATGCAGCTGGAGCTTCAGAA
CAATCCGGATGACCTCTTCGAGCATGCGGTGGACAGCGCAACCGCCAACGGACTGATCTCCGAAGGAGATGTGGTAATCG
TTACCGCCGGCGTGCCGCTGGGCGTATCCGGCACGACGAACCAGATCAAGGTGCAGATTGCCGGCAATATCATGATCCGC
GGCAAGGGAGTCAACGGCAGCCGGGTGTCCGCCAATGTATGCATCGCGGATTCCGCGGAGTCACTGGAACGGGATTTCAA
GACCGGAGACATTATCGTGGCAAAAGACACCGATAACAGCATGCTGCACTATCTGCGCCAGGCTTCCGGATTGATTCTGG
AATCCAAAAGCTCCAATTCCCACGGCGTGATTGCGGGCATGAGCCTGGATCTTCCGGTGATCCGTGATGCCAGTCACGCG
ACGGAAATCCTGAAGACCGGCAGCTATATTACGATGGATCCGAAGCGGGGAACGGTAAGCACCGCCAAAAATTAA

Protein sequence :
MTTFRKTKIICTLGPATDQGDTLKQLALNGMNVARFNFSHGSHEEQAERFQKLVAVREETGLPIATLLDTKGPEIRVKDF
KEGAIELKEGQKFTLSIGDFLGDENRVAISFEDLYQDVEPGSRILIDDGLIEMHVDEISGTDIICTVDNGGPVSNHKGVN
VPNAALSMPFISEKDRSDIEFGIRQGFDFIAASFTRTADDILEIRKILEDNGGTEIQVIAKIENKQGVDNIDDIIRVSDG
VMVARGDMGVEIPFEDVPAIQKKIIKKTYTAGKQVITATQMLDSMIKNPRPTRAETADVANAVYDGTSVIMLSGETAAGL
YPVEALKTMVRVATRTEQDIDYAKRLKNRDHTEENDITNAIAHATCTTALDLNASAIISVSSSGRTARMVSKYRPSCPII
GCSTYDHVCRRMNMSWGVIPMQLELQNNPDDLFEHAVDSATANGLISEGDVVIVTAGVPLGVSGTTNQIKVQIAGNIMIR
GKGVNGSRVSANVCIADSAESLERDFKTGDIIVAKDTDNSMLHYLRQASGLILESKSSNSHGVIAGMSLDLPVIRDASHA
TEILKTGSYITMDPKRGTVSTAKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-90 46
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-90 46
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 7e-90 46
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-90 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CXIVA_13380 YP_004708406.1 hypothetical protein VFG0479 Protein 7e-91 46