Gene Information

Name : CXIVA_09930 (CXIVA_09930)
Accession : YP_004708062.1
Strain : Clostridium sp. SY8519
Genome accession: NC_015737
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1068727 - 1069410 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
ATGAATTTATTAGAGGTCAAAAACATTTGTAAGACCTATGGCAGCGGAGAAACCGCAGTCAAGGCTTTGAAGGATGTCAG
TTTTTCCGTTCCCAAGGGGGAATATGTGGCCGTCGTGGGGGAATCCGGTTCCGGCAAAAGTACGCTGCTGAACATGATCG
GCGCGCTGGACACGCCCACGACCGGCAAGGTGCTGATCGACGGTAAGGACATTTTTGCCATGGACGAGCGCAAGCTGACG
GTATTCCGCCGCAGGAACATTGGCTTTATCTTTCAGGCGTTTAACCTTGTGCCGGAGTTAACGGTGGAGCAGAACATAAT
CTTCCCGGTGCTGCTGGACTACCAGAAGCCGGATAAGAAATATCTGGAAGAACTTCTTGCGGTACTGAACCTGAAAGAGC
GCCGGAACCATCTGCCCAGCCAGCTCTCCGGCGGACAGCAGCAGCGTGTGGCGATTGGCCGTGCGCTCATTACCCGGCCA
GCCCTGATCCTGGCTGACGAGCCGACCGGCAATCTGGACACCCAGAACAGCAGCGAGGTCATTGCCCTGCTGAAAGAAGC
ATCCAAAAAGTATGAGCAGACGATTATTATGATTACCCACAACCGTAGTATCGCGCAAACGGCTGACCGGGTATTGCAGG
TATCGGACGGTAACCTCACCGATTTTGGGAGGTGCCGGGAATGA

Protein sequence :
MNLLEVKNICKTYGSGETAVKALKDVSFSVPKGEYVAVVGESGSGKSTLLNMIGALDTPTTGKVLIDGKDIFAMDERKLT
VFRRRNIGFIFQAFNLVPELTVEQNIIFPVLLDYQKPDKKYLEELLAVLNLKERRNHLPSQLSGGQQQRVAIGRALITRP
ALILADEPTGNLDTQNSSEVIALLKEASKKYEQTIIMITHNRSIAQTADRVLQVSDGNLTDFGRCRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-40 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CXIVA_09930 YP_004708062.1 hypothetical protein CP001581.1.gene798.p Protein 7e-95 86
CXIVA_09930 YP_004708062.1 hypothetical protein CP001581.1.gene598.p Protein 1e-58 54
CXIVA_09930 YP_004708062.1 hypothetical protein NC_012469.1.7686878. Protein 3e-42 45
CXIVA_09930 YP_004708062.1 hypothetical protein NC_008702.1.4606598. Protein 7e-36 45
CXIVA_09930 YP_004708062.1 hypothetical protein NC_012469.1.7685735. Protein 3e-38 41