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Name : lysS (MEPCIT_358) Accession : YP_004706855.1 Strain : Candidatus Moranella endobia PCIT Genome accession: NC_015735 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 426509 - 428089 bp Length : 1581 bp Strand : + Note : predicted based on similarity to TIGRFAM lysS_bact and related proteins in nr DNA sequence : ATGGTAATCTTGATCAATTTATTGAGGCCAGCCTTAAAGCAGGGCTATGAAGAAAACCACATGTATGAATTAAAATCACA GTATGGTGCCCATCAGGCGCTGTATTTAAACAATAAGATGCGTTATAGGCGGGACAAACTGACCAAATTACGACAGCATG GCAGCGCTTTTCCTAATGATTTTCGGCGGAACGCTGTTTCCGACCAGCTACATGCTTGCTACGGCGAGAAAAGTAATGAA GAGCTGAACGCGTTGAATATCGTAGTCCGCGTCGCAGGACGCATGATGACCTGTCGCATTATGGGCAAAGCATCATTTGC GACTTTACAGGACGTGGGAGGGACAATCCAGCTGTACGTCGTCCGCGATGATCTTCCTAATGGCCAGTATAATGCTCAAT TTAAACAATTGGACCTTGGGGACATTGTGGGCGCGTGTGGTAAATTATTTAAAACCCGTACCGGCGAATTGTCTGTGCAT TGTAACGATATTAATCTGCTTACCAAGGCTATACGTCCGCTGCCAGATAAATTTCACGGCCTAGCAGATCAGGAAACCCG CTATCGTCAGCGTTATCTCGATCTTATTGCCAACGAAGAATCGCGCCAAATATTTAAAATACGTTCGCGCATCATGGCGG AAATTCGCCGTTTTATGATGGATAACTATTTTATGGAAGTAGAAACGCCAATGATGCAAACTATCCCAGGCGGGGCAGCC GCTCGGCCGTTTATTACCCACCATAACGCTTTGGATATCGATATGTATCTGCGGATAGCACCAGAACTTTATCTGAAGCG TTTGGTAGTTGGCGGTTTTGAACGAGTATTTGAAATCAATCGCAACTTTCGTAATGAAGGACTGTCGCCGCGCCATAACC CAGAGTTTACTATGATGGAACTCTATATGGCCTACGCTGATTACCGCGACCTAATGGTGCTGGTTGAAGAGTTATTCCGT ACCTTAACTAATCGGGTATTTGGTAGTAGCGTAGTGCATTACGGTAATCAGACATTCGATTTCGGCAAACCGTTTATCCA GATGACCATGACAGAAGCAATCTGCCACTTTTACCCGGAAACAATGCCAAAAGCGCTAGAAAATATTGCCACTGCGACCG CTATTGCAGCTTCGCTGGGTATCAAGGTAGACAACAGCTGGGGTCTTGGTCGGGTGCAGACTGAAATATTTCAAGAAACG GCGGAAAGTAATTTAATTCAGCCAACGTTCATTACCGCCTACCCGTTGGAAGTATCGCCGCTAGCGCGCAGCAACGACGA CAACCCGTTTTTCGCCGACCGTTTTGAATTGTTTATCGGCGGGCGGGAAATTGGCAATGGTTTCTCTGAGCTTAATGATG CCGAAGAGCAAGCTGCGCGCTTTGTCGCACAGGCACAGGCCAAGAACTACGGTGATGACGAAGCAATGTTTTATGACGAT GATTATGTCAATGCGTTGGAATACGGCCTGCCGCCTACCGCCGGCTTAGGTATCGGTGTCGATCGTTTGATGATGATATT GACAAACAGTCATACCATTCGCGATGTAATCCTATTTCCAGTACTAAGGCCGCAAAAATAA Protein sequence : MVILINLLRPALKQGYEENHMYELKSQYGAHQALYLNNKMRYRRDKLTKLRQHGSAFPNDFRRNAVSDQLHACYGEKSNE ELNALNIVVRVAGRMMTCRIMGKASFATLQDVGGTIQLYVVRDDLPNGQYNAQFKQLDLGDIVGACGKLFKTRTGELSVH CNDINLLTKAIRPLPDKFHGLADQETRYRQRYLDLIANEESRQIFKIRSRIMAEIRRFMMDNYFMEVETPMMQTIPGGAA ARPFITHHNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLMVLVEELFR TLTNRVFGSSVVHYGNQTFDFGKPFIQMTMTEAICHFYPETMPKALENIATATAIAASLGIKVDNSWGLGRVQTEIFQET AESNLIQPTFITAYPLEVSPLARSNDDNPFFADRFELFIGGREIGNGFSELNDAEEQAARFVAQAQAKNYGDDEAMFYDD DYVNALEYGLPPTAGLGIGVDRLMMILTNSHTIRDVILFPVLRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-155 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004706855.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-155 | 63 |
