Gene Information

Name : rplS (MEPCIT_317)
Accession : YP_004706819.1
Strain : Candidatus Moranella endobia PCIT
Genome accession: NC_015735
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 379501 - 379875 bp
Length : 375 bp
Strand : -
Note : predicted based on similarity to TIGRFAM rplS_bact and related proteins in nr

DNA sequence :
ATGGCTAGTTGGGGCCAAAGAACAATTATGAGCAACATTATTAAGCAAATTGAACAAGAACAGATGAAGCAAGACATACC
TTCTTTCCGACCAGGTGATTCGGTAGAAGTCAAAGTGTGGGTTGTTGAAGGCAGCAAAAAACGTCTACAAGCATTCGAGG
GCGTGGTTATCGCTATTCGTAACGGTGGTCTACATTCTGCATTCACTCTTCGCAAAATAGCCAATGGCGAAGGCGTTGAG
CGTGTTTTCCAGACGCATTCGCCAGTAATCTACAGTATTAATGTGACACGTCGTGGCGCAGTTAGGAAGGCCAAACTATA
TTACCTGCGCCAATGTACCGGTAAGGCAGCACGCATCAGAGAAAGACTGCACTAG

Protein sequence :
MASWGQRTIMSNIIKQIEQEQMKQDIPSFRPGDSVEVKVWVVEGSKKRLQAFEGVVIAIRNGGLHSAFTLRKIANGEGVE
RVFQTHSPVIYSINVTRRGAVRKAKLYYLRQCTGKAARIRERLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 7e-37 89
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-23 59