Gene Information

Name : ssb (MEPCIT_025)
Accession : YP_004706560.1
Strain : Candidatus Moranella endobia PCIT
Genome accession: NC_015735
Putative virulence/resistance : Virulence
Product : single-strand DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 28211 - 28771 bp
Length : 561 bp
Strand : -
Note : predicted based on similarity to TIGRFAM ssb and related proteins in nr

DNA sequence : 
ATGGTTAGCAGAGGCGTTAACAAAGTGATTCTAGTCGGAAATCTGGGCCAGAATCCGGAAGTCCGCTATATGCCTAATGG
TGGTGCGGTAGCTAATATCACTCTAGCAACCTCTGATAGTTGGCGTGACAAGCAAACCGGAGAAACCAAAGAAAAAACGG
AATGGCACCGTGTGGTATTGTTTGGCAAGCTGGCTGAGGTGGCGGTTGAATATTTACGTAAGGGCTCCCAAGTTTATATT
GAAGGGTATTTACAAACTCGCAAATGGCAAGACCAAAGCGGTCATGATCGATATACTACCGAAATAGTAGTTAACATCGG
TAGTGGTACAATGCAAATGCTCGGTAGTCGCCACAGCAGCGCAGCCAGTGGTAACACTAGTAATGTACATTTACAGCAGC
ATGGTAGTTGGGAACAATCTCAGCAATTACCAGAGAGTGAAAATAATGCGCAATACAGCGACAGCGGAGGAAAAGTATCT
GCGGGACGTCAAATACCGAACTCATCATCAGTGCATAGAAATGAACCAACGATAGACTTTGATGATGATATTCCTTTTTA
A

Protein sequence : 
MVSRGVNKVILVGNLGQNPEVRYMPNGGAVANITLATSDSWRDKQTGETKEKTEWHRVVLFGKLAEVAVEYLRKGSQVYI
EGYLQTRKWQDQSGHDRYTTEIVVNIGSGTMQMLGSRHSSAASGNTSNVHLQQHGSWEQSQQLPESENNAQYSDSGGKVS
AGRQIPNSSSVHRNEPTIDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-43 58
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-43 58
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-43 58
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 1e-34 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_004706560.1 single-strand DNA-binding protein VFG0576 Protein 2e-44 62