Gene Information

Name : LGMK_04655 (LGMK_04655)
Accession : YP_004705612.1
Strain : Leuconostoc sp. C2
Genome accession: NC_015734
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 959874 - 960626 bp
Length : 753 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGTCGAAGAGCAATATCATTAAAGTACAGCAGTTATCCAAACACTATGACAATCATAAAATTTTAGACAATGTCAATCT
AGAGATTTTTGAATCAGATTTTACTGTCATCATGGGGCCTTCAGGTGCTGGGAAATCAACGTTGTTACAAAACATATCAA
CGATGGATAAACCAACTAGTGGCAAAGTTATATTTAACCAACAAGATCTCACAAAACTTACAGACAAAGCGTTGTCATTG
TTTAGAAAAAAAGATATTGGTTTTATTTTCCAGTCATTTAACCTTATTGAACATTTAAGTGTTTTGGAAAATGTTTGTTT
GCCAGGATTATTACTGAAAACAGAGTCTAAACAACAAGTAATCCAAAGAGCTAAGCAACTGCTTACCGGATTAGGGCTTG
ATGCCCATATGGAGCAAGCTATTACACACTTATCCGGTGGTCAAAAACAACGTGTTGCTATTGCTAGAAGTTTGATTAAC
CAACCTAAAATTTTGTTCGCTGATGAACCAACAGGTGCCTTAGATTCGACTTCTGGTATTGAGGTGCTTGATAGCCTCAC
GTTGAATAATCAAAATGGTCAAACAATTGTTATGGTGACACATGATTTAAAAGCTGCACTACGTGCTGATCGTATTCTGT
TTATTAAAGACGGTACAATTTTTGGAGATAGAAATTTTACGCCTTATAATGCTAGTCAAATTGCAGCACGACGAATAGAA
ATTGAATCTTGGTTACAAGAAATGGGATGGTAA

Protein sequence : 
MSKSNIIKVQQLSKHYDNHKILDNVNLEIFESDFTVIMGPSGAGKSTLLQNISTMDKPTSGKVIFNQQDLTKLTDKALSL
FRKKDIGFIFQSFNLIEHLSVLENVCLPGLLLKTESKQQVIQRAKQLLTGLGLDAHMEQAITHLSGGQKQRVAIARSLIN
QPKILFADEPTGALDSTSGIEVLDSLTLNNQNGQTIVMVTHDLKAALRADRILFIKDGTIFGDRNFTPYNASQIAARRIE
IESWLQEMGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LGMK_04655 YP_004705612.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-35 45
LGMK_04655 YP_004705612.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-32 43
LGMK_04655 YP_004705612.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-38 42
LGMK_04655 YP_004705612.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-34 42