Gene Information

Name : LGMK_02710 (LGMK_02710)
Accession : YP_004705223.1
Strain : Leuconostoc sp. C2
Genome accession: NC_015734
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 554959 - 555855 bp
Length : 897 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGACACAAGAAATAGATAACGCCATTGCAGATTATTTACATTATATTCGCATTGAGCGTGGCTTATCGGACAACACAAT
TAAGAGTTATCAGCAAGATTTAAAGCAATTTAGCGTCTATATGACGGCTGAAAACCTAAATTTGAATGCGGTTGATCATG
TTGTTATATTAACATGGTTAAATCAGTTACGTGAGTTAAATAAATCAAATAATTCAGTGATTCGCATGGTAACATCATTG
CGTAAATTTTTTGGTTACTTGTTACAAGAAAACGTTATACGGCATAACCCAATGAGTGATGTAAAACCACCTAAAAAGGC
AGAACATTTACCAGCAGTATTGAGCGTTGCAGAAATTGATGCATTGTTGCAAGTGCCGACTGAAAAAACTGCGTTAGGGT
TACGGAATAGAGCACTTATCGAAGTGATGTACGCTACTGGACTACGTGTAAGCGAGCTGGTCAATTTAAAAATGAGCGAC
TTGCACTTGCAACTCGGCTTAATTCAAACGATTGGGAAAGGTGATAAGGAGCGAATTATCCCAATTGGTGAGATTGCTAC
TGAGTGGTTAGAACGCTATTTTTCTCACAGCCGGTTAACGCTATTAAAAGACAAGGTGTCACCGTTTGTTTTTTTAAATG
ATCGTGGAACACAATTGAGTCGTCAAGGTGTTTGGAAAATCATTAAAAATTTAGTATCAGCTGCTGGTATCGATAAAGAC
GTGTCGCCACATACATTGAGGCATTCTTTTGCGACGCATATTTTAGAAAATGGTGCAGATTTGCGAATCGTGCAAGAACT
ATTGGGTCATGCTGATATTTCAACAACACAGATTTACACACACATCTCAAAGAAAAGATTAAGCGAAGTATATGATGCTT
TTCATCCGCGAGCGTAA

Protein sequence :
MTQEIDNAIADYLHYIRIERGLSDNTIKSYQQDLKQFSVYMTAENLNLNAVDHVVILTWLNQLRELNKSNNSVIRMVTSL
RKFFGYLLQENVIRHNPMSDVKPPKKAEHLPAVLSVAEIDALLQVPTEKTALGLRNRALIEVMYATGLRVSELVNLKMSD
LHLQLGLIQTIGKGDKERIIPIGEIATEWLERYFSHSRLTLLKDKVSPFVFLNDRGTQLSRQGVWKIIKNLVSAAGIDKD
VSPHTLRHSFATHILENGADLRIVQELLGHADISTTQIYTHISKKRLSEVYDAFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-54 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-54 41