Gene Information

Name : LGMK_00140 (LGMK_00140)
Accession : YP_004704715.1
Strain : Leuconostoc sp. C2
Genome accession: NC_015734
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 28416 - 29960 bp
Length : 1545 bp
Strand : +
Note : COG0286 Type I restriction-modification system methyltransferase subunit

DNA sequence :
ATGACAGAAAATACTTCCAAAACACTCGAACAGGCCCTTTGGAATTCAGCCAATGTTTTACGTGGCAAAATGGATGCAAG
TGAATATAAAAATTACCTTTTAGGATTGATTTTTTACCGATTTCTAAGTCATAAAACAATGGCAGCAGTGATCGATGCAA
CAGGCGAGATTGGCGATCCTATCGCTATTTATAAACAATATTGGCAAGATCAGCGCGATGATATTATTGCTGAACTTTAC
ACAGCCAATGGCTTTATTATTCAACCCGATGAACTATTTGATAGCTTGGTAACACGTATTCAAAATCACCAGTTTCAAGT
TTCTGATTTAAAGACTGCTTTATTTAACTTAGAACAATCTGTTAAAGGACATAAATCTGAAGATGATTTTGAAGGGCTGT
TTTCAGATATTGATTTAGATTCTAATCGATTAGGCAAAAATCCTAGTCAGGTTATGAATGATACAATTACTGCGTTGAAA
GATATTGATTTTGATTCAGATCGTGATGTACTTGGTGATGCGTATGAATACTTGATTTCAGAGTTTGCTATGAGCGCTGG
TAAAAAGGCTGGTGAGTTTTACACGCCACGCACGGTAAGTGAAATCATAGCACGTATTGTAGCCAAGGGCCATGAGGACG
GCGATAATCAGATTAGAAGTGTCTATGATCCAGCAATGGGATCAGGGTCGTTACTCTTGACTGTTGCAGGTCAGGTAACT
GGAAACAAAACAATTGCCTATCATGGACAAGAGTTGAATACCACAACATTTAACTTGGCACGTATGAATTTGATGTTGCA
TGGTGTGAGTTTTGAAGATATTCATGTACGTAATGGCGATACATTGGACAACGATTGGCCAGCGCAAGAACCTTATCAAT
TTGACGCTGTTGTGATGAACCCGCCATACTCAGCACATTGGAATAACGACGAGTCACGTCTCAGTGAACCACGTTTCCGT
GATTATGGTAAGCTAGCACCAAAATCAAAGGCTGATTATGCCTTCTTGTTACATGGTCTGTACCATCTCAAACCTTCAGG
GACTATGGGAATTGTTTTACCACATGGGGTCTTATTCCGAGGTGCTGCAGAAGGCAAAATTCGTCAGCAGCTAATCGATT
CAAACATGATTGATGCGGTGATTGGCTTACCAGCTAATATTTTTTATTCGACATCAATACCAACAGTTATTTTAATTTTG
AAAAAAAATAAGGCAACAAAAGATGTGTTGTTTATTGATGCAAGTAATCAATTTACTAAGGGTAAAAATCAAAATGTCTT
ATCAGAAGAGAATATTGACAAGATTGTTTCAACTTATGACAAGCGACAAGACGTTGAAAAATATGCGCATGTGGCTTTAA
TTGATGAAATCAAAGAAAATGATTATAATCTCAATATTCCACGTTATGTCGATACTTTTGAAGAAGAAGAGCCAATTGAT
TTAGAAGCTGTTCGTCAGCAATTGAAACAAGATGACATCGAAATCCAGAAATTAGAGAAGGAAATAGAAGAAACACTCAA
GGAATTAGGCGTTAAAATTGAGTGA

Protein sequence :
MTENTSKTLEQALWNSANVLRGKMDASEYKNYLLGLIFYRFLSHKTMAAVIDATGEIGDPIAIYKQYWQDQRDDIIAELY
TANGFIIQPDELFDSLVTRIQNHQFQVSDLKTALFNLEQSVKGHKSEDDFEGLFSDIDLDSNRLGKNPSQVMNDTITALK
DIDFDSDRDVLGDAYEYLISEFAMSAGKKAGEFYTPRTVSEIIARIVAKGHEDGDNQIRSVYDPAMGSGSLLLTVAGQVT
GNKTIAYHGQELNTTTFNLARMNLMLHGVSFEDIHVRNGDTLDNDWPAQEPYQFDAVVMNPPYSAHWNNDESRLSEPRFR
DYGKLAPKSKADYAFLLHGLYHLKPSGTMGIVLPHGVLFRGAAEGKIRQQLIDSNMIDAVIGLPANIFYSTSIPTVILIL
KKNKATKDVLFIDASNQFTKGKNQNVLSEENIDKIVSTYDKRQDVEKYAHVALIDEIKENDYNLNIPRYVDTFEEEEPID
LEAVRQQLKQDDIEIQKLEKEIEETLKELGVKIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 3e-121 55
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-118 54
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 4e-118 54
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 2e-118 54
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 4e-118 53
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 1e-117 53
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 3e-118 53
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 7e-118 53
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 7e-118 53
ORF6 BAC22943.1 - Not tested etd PI Protein 8e-118 53
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 7e-118 53
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 3e-118 53
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 7e-118 53
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 3e-118 53
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 6e-118 53
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 3e-118 53
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 9e-117 53
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 4e-118 53
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 2e-117 53
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 1e-118 53
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 3e-118 53
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 3e-118 53