Gene Information

Name : LGMK_07875 (LGMK_07875)
Accession : YP_004706247.1
Strain : Leuconostoc sp. C2
Genome accession: NC_015734
Putative virulence/resistance : Unknown
Product : rRNA large subunit methyltransferase
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1589218 - 1589697 bp
Length : 480 bp
Strand : -
Note : COG1576 Uncharacterized conserved protein

DNA sequence :
ATGAACATCAAATTAATTACAGTTGGTAAATTAAAAGAAAATTACCTTCGAGCGGGTATTGCAGAGTATACTAAACGGCT
ATCACGCTTTGCTAAAATAAACATGATTGAATTAGCTGATGAAAAGACACCTGAAAAAGCTAGTGATGCCCAGAATCAGC
AAATTATGTCTAAAGAAGGACAACGTATTCAGGAAAAAATTGGCACGCGAGACTTTGTCATTGTATTAGCTATTGAAGGG
CAACAATTAGCATCAGAGGATTTTTCAAAAAAAATGACTGATATTACAGTAGATGGGTACTCAGATATAACATTTATTAT
TGGTGGGTCACTCGGACTTGATCCAATGATTAAACAACGTGCTAATTTAAAAATGAGTTTTGGACTATTAACATTACCGC
ATCAACTCATGCGACTTGTCCTCATTGAACAAATATATCGTGCTTTTATGATCCAACAAGGTTCGCCCTATCATAAATGA

Protein sequence :
MNIKLITVGKLKENYLRAGIAEYTKRLSRFAKINMIELADEKTPEKASDAQNQQIMSKEGQRIQEKIGTRDFVIVLAIEG
QQLASEDFSKKMTDITVDGYSDITFIIGGSLGLDPMIKQRANLKMSFGLLTLPHQLMRLVLIEQIYRAFMIQQGSPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-37 51
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-37 51
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 5e-37 50
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 5e-37 50
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 5e-37 50
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 5e-37 50
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 7e-36 50
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 5e-37 50
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 6e-36 50
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 3e-36 50
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 5e-37 50
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 5e-37 50
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 8e-37 50
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 5e-37 50
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 5e-37 50
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 8e-37 50
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 5e-37 50
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 9e-34 49
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-21 46