Gene Information

Name : LGMK_07530 (LGMK_07530)
Accession : YP_004706179.1
Strain : Leuconostoc sp. C2
Genome accession: NC_015734
Putative virulence/resistance : Virulence
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1511121 - 1511864 bp
Length : 744 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGATAAAAGTCCGAAATATGACGGTTGCCTATAGTGGGCAACCAATATTCACGAACCTATCAATCGCGTTTGAACCTGG
GAAAATCACAGGGATTATTGGACCAAACGGTGCCGGTAAGTCAACAATGATTAAAGGTATTTTGGGATTGATACACAAGC
AAAGTGGCGATGTGACTTTGCATGATAAACCGGTTGCTAAGCAACTAAAAAATGTTGCATATGTTGAACAACGTGCAGCG
CTTGATTTAACATTTCCGATTAATGTTTTTGATACTGTTTTAACTGGAACCTATCCTAATCTTGGATTATTTAAGATTCC
AAGTGAAAACGATAAAAGTGCTGCACGTCAAGCGCTAGCTGATGTTAATTTGTCGGAATTTTCACAACGCCAAATTGGTG
AACTCTCGGGTGGACAATTGCAACGCGTTTTCGTTGCACGGGCAATTGTACAAGAAGCAGATGTGATTATTCTAGATGAA
CCCTTTGTAGGAATTGATATGAAATCCGAAGCAGAAATCATGTCAATTTTGAAACGTTGGCAAATGGCTGGAAAGACAAT
TATTGTTGTGCATCATGACCTTAATAAAGTGACCAAGTATTTTGATAATTTAGTTATTATCAATCGTGGTATTGTTGCTG
CAGGACAGACGACAGAGGTCTTTACCAAAGAAAATATTACAACGGCCTTTAGTGGGGATTTGTCAACAATATTATTCTCA
GATAAGGAGCCTGAACATGCGTAG

Protein sequence : 
MIKVRNMTVAYSGQPIFTNLSIAFEPGKITGIIGPNGAGKSTMIKGILGLIHKQSGDVTLHDKPVAKQLKNVAYVEQRAA
LDLTFPINVFDTVLTGTYPNLGLFKIPSENDKSAARQALADVNLSEFSQRQIGELSGGQLQRVFVARAIVQEADVIILDE
PFVGIDMKSEAEIMSILKRWQMAGKTIIVVHHDLNKVTKYFDNLVIINRGIVAAGQTTEVFTKENITTAFSGDLSTILFS
DKEPEHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-49 45
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-49 45
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-44 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-44 42
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-44 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-43 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LGMK_07530 YP_004706179.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 3e-52 45
LGMK_07530 YP_004706179.1 manganese ABC transporter ATP-binding protein BAC0350 Protein 4e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LGMK_07530 YP_004706179.1 manganese ABC transporter ATP-binding protein VFG0526 Protein 3e-44 42