Gene Information

Name : LGMK_05040 (LGMK_05040)
Accession : YP_004705689.1
Strain : Leuconostoc sp. C2
Genome accession: NC_015734
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1035932 - 1037071 bp
Length : 1140 bp
Strand : -
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAGCGATTGGACAGATGTTATTCAAGCTGCAACAACGCATGATCCATTATCTGGTGCTGTGAATACACCAATACAATT
AAGTTCAACTTTTAATCAACCTGATTTTGATCATTTTGGTCGATTTGACTATGCCCGATCTGGCAATCCAACACGAGAAT
CGGGAGAGCAGGCTGTTGCAAAATTAGAGCATGGCAAATATGGGTATCTGTTTAGCACAGGGATGGCTGCAATCAGCAGT
GTTTTGTTCACATTATCTGCTGGTGATCATATTGTTGTTAGCAAGCATGTCTACGGTGGTACTTTTCGAGTATTATCTGA
TGTGTTACCTCGATGGGGTATCACGCATGATTTTGTAGATTTCACTGATTTAGATGCTATTGAGTCAGCTATTCGACCAG
AAACAAAGGCATTATATATTGAAACGCCGTCCAATCCGGTACTTAATATTACTGATATTCGATCCGTAGTAGCACTTGCA
AAGTCGCATGGTTTAATCACAATTGCAGATAATACATTTTTGTCGCCATTCTTACAAAAGCCATTAGATTTAGGCGTGGA
TATCGTGGTACATTCAGCAACCAAGTTTTTATCAGGACACTCTGATATCTTAGCTGGTGTGGTCGTGACGAATAGTCGTG
ATTTAGCTGAAAAAATTTATTTTATGCAAAACGCAGTTGGGGCGACACTAGGTGTGTTTGATACATGGCTATTGCTACGA
GGCATTAAAACATTAGGCGTGCGCATGACACAGTCCAGCCAATCAGCACAAAAGATAGCCAATTATCTGTCAACACATGA
TAAAGTAGAACGTGTGTTATATCCAGGATTGGCTAGTCACCCAGGGCACATCATTCATGCCAACCAGTCAAAGTCAGGTG
GTGCAGTTTTGAGCTTTGATGTTGGATCAGAAGCTCATGCTAAAACAGTGGTCGAAGCATTAAAAATACCCGTTTTCTCA
GTGAGTTTAGGGGCGGTGGAAACCATCATCAGTTATCCACCAAAGATGAGTCATGCAGAATTAAATGCAGATGAATTGCG
TGATACTGGTATTACACCAGGGTTACTAAGATTCTCCGTTGGTTTGGAAGATGCGGATGATCTGATTGCTGATTTAACAC
AAGCGTTAGCTTTAATTTAA

Protein sequence :
MSDWTDVIQAATTHDPLSGAVNTPIQLSSTFNQPDFDHFGRFDYARSGNPTRESGEQAVAKLEHGKYGYLFSTGMAAISS
VLFTLSAGDHIVVSKHVYGGTFRVLSDVLPRWGITHDFVDFTDLDAIESAIRPETKALYIETPSNPVLNITDIRSVVALA
KSHGLITIADNTFLSPFLQKPLDLGVDIVVHSATKFLSGHSDILAGVVVTNSRDLAEKIYFMQNAVGATLGVFDTWLLLR
GIKTLGVRMTQSSQSAQKIANYLSTHDKVERVLYPGLASHPGHIIHANQSKSGGAVLSFDVGSEAHAKTVVEALKIPVFS
VSLGAVETIISYPPKMSHAELNADELRDTGITPGLLRFSVGLEDADDLIADLTQALALI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-84 49
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-83 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-80 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LGMK_05040 YP_004705689.1 cystathionine beta-lyase BAC0207 Protein 2e-57 41