Gene Information

Name : PPS_0798 (PPS_0798)
Accession : YP_004700257.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 903867 - 904835 bp
Length : 969 bp
Strand : -
Note : -

DNA sequence : 
ATGCACGACTCATCCGCCCACAGCAAGCCGCGTATCGCCATCAGCGCCTGCCTGACCGGGCACAGCGTGCGCTATAACGG
CGGCCACAAGGCCTCCGACCTGTGCCGTATGCAACTCGAGGAACATTTCGACTGGTTGCCGGTGTGCCCGGAGGTGGCCA
TCGGCCTGGGCGTGCCGCGCGACCCGATCCGCCTGGTCGGCGACCCCGAGCAGCCGGAAGTGGTAGGCACCCGCAACCCC
GGCATGGACCTGACCGGACCGCTGCGCAGCTATGGCGAGCAAATGGCGGCGGAACTCGATGATATCTGCGGCTACATCTT
CATGCAGAAATCGCCTTCCTGTGGCCTGGAGCGGGTCAAGGTATACCAAGACAATGGCCACCCTGCCTTCCACGGTGGGC
GGGGAGTGTATGCGCAGGCGTTCTGCGCACGGCGGCCGGACCTGCCGGTGGAAGAAGAAGGCCGCCTGCACGACCCCATA
CTGCGCGAGAACTTCATCAGCCGCGTGTACGCGTACGCCGACTGGCAACGCCTGCTGGCCGAAGGCCTGAGCCGTGGCGC
TCTGGTGCGATTCCACTCACGCTACAAGTACCTGTTGATGGCCAACAACCCGCAGGCCTACCGCAGCCTCGGGCGCCTGC
TCGGCAGCATGAGCAAGGACGATGACCCGCAAAGCATCGGCCCGCGCTACTTCAGCCAGCTGATGCAGGCTCTGCGCCGC
TGTGCCAGCCGCGGCACTCATTGCAACGTGCTGCAGCATCTGAGCGGCTACTTCAAGGACATCCTCACACGGCAGGACAA
AGCCGAGCTGCAGGCCATCATCGGCCAATACCAGCAAGGCGTGGTGCCGCTGGTAGTGCCGCTGACCCTGCTCAAGCACC
ATTTGCGCAAGCATCCCGATCCGTATCTGCAGCAGCAGGCCTACCTTCAGCCGCACCCCGAGAGCCTGGGCCTGCGCAAT
GCCGTCTGA

Protein sequence : 
MHDSSAHSKPRIAISACLTGHSVRYNGGHKASDLCRMQLEEHFDWLPVCPEVAIGLGVPRDPIRLVGDPEQPEVVGTRNP
GMDLTGPLRSYGEQMAAELDDICGYIFMQKSPSCGLERVKVYQDNGHPAFHGGRGVYAQAFCARRPDLPVEEEGRLHDPI
LRENFISRVYAYADWQRLLAEGLSRGALVRFHSRYKYLLMANNPQAYRSLGRLLGSMSKDDDPQSIGPRYFSQLMQALRR
CASRGTHCNVLQHLSGYFKDILTRQDKAELQAIIGQYQQGVVPLVVPLTLLKHHLRKHPDPYLQQQAYLQPHPESLGLRN
AV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-59 44
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 6e-59 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 6e-59 43
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 5e-59 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 4e-59 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_0798 YP_004700257.1 hypothetical protein VFG0490 Protein 2e-59 43