Gene Information

Name : PPS_0737 (PPS_0737)
Accession : YP_004700198.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : ISPpu14, transposase Orf3
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 841723 - 843312 bp
Length : 1590 bp
Strand : +
Note : -

DNA sequence :
GTGGATCGCTTTGGTAAAATCCACGGCATGACTTCCTCGCCCAATCTCGCCCAAATGACACCCGAACAACTGCGCGCACT
CGCTGCGCAGTTGCTGTCGAAGGTCGACACCATGGCGCGAAAAATCCATCGTGACGAGACGATCATCGAGCAGCTCTCTC
ACGAGATTGCCATCCTCAAGCGCCACAAGTTCGCCAAGCGCAGCGAGCAGATCAGCCCAGCGCAAGGCAGCTTGCTGGAT
GACTTGCTCAACACCGACCTTGAGGCTATCGAGGCAGAACTGAACGCGCTTCGTCCCGCCCCAACGTCGGACGAACCCCG
CCAAAAGCCCAAGCGCGCGCCGCTACCGCCGCAGTTCCCACGTACCGTCATTCGTCACGAGCCAGAGAACACCCAGTGTG
TCTGCGGGTGCCAGCTTCAGCGCATCGGCGAAGACGTTAGCGAGAAGCTGGATTACACACCTGGCGTGTTTACCGTTGAG
CAGCATGTACGTGGAAAGTGGGCCTGCCGCCAGTGCGAAACACTGATCCAAGCACCGGTGCCGGCCCAGGTGATCGACAA
GGGCATCCCGACCGCAGGCCTACTGGCGCATGTGATGGTAGCCAAATTCGCTGACCATCTGCCGCTGTACCGGCAAGAAA
AGATCTTTGGCCGTGCAGGCCTGGCGATCCCGCGTTCAACGCTGGCTCAATGGGTGGGCCAAACTGGCGTACAGCTACAA
CCGCTGGTGGATGCACTGCGCGAAGCGGTGCTGGCTCAGCGAGTCGTGCATGCCGATGAAACTCCGGTGCAGATGCTGGC
TCCCGGAGAGAAGAAAACGCATCGAGCTTATGTCTGGGCTTATTGCACGACGCCTTACTCGGCCCTCAAGGCGGTGGTCT
ACGACTTCAGCCCCAGCCGCGCCGGCGAACATGCGCGCAACTTCCTGGGCACCTGGAACGGCAAGCTGGTCTGTGATGAC
TTCGCGGGTTACAAGGCCAGCTTCGACCTGGATATCACCGAAATCGGCTGCATGGCGCATGCCCGCCGTAAGTTCTTCGA
CCTGCATGCAGCGAACAAAAGCCAGTTGGCCGAACAAGCGCTGCACTCAATCGGCGGGCTGTACGAAGTCGAACGGCAGG
CCAAAGACATGTGCGATGAAGAACGATGGCGATTACGCCAAGAAATAGCGGCGCCCATTGCACAGAAGTTACATGAATGG
ATGCTGGCTCAGCGCGACCTCGTGCCCGAGGGGTCGGCCACGGCCAAGGCTCTGGATTACAGCTTGAAACGCTGGGTAGC
GCTGATGCGCTACCTGGATGATGGTGCCGTACCCATCGACAACAACCCGGTGGAGAACACGATCAGACCATGGGCGCTTG
GGCGCTCCAATTGGTTGTTCGCCGGGTCTCTGCGCAGTGGCAAACGAGCGGCAGCGATCATGAGTTTGATCCAGTCGGCA
CGCATGAACGGGCATGATCCGTACGCATATCTCAAGGATGTACTGACGCGATTGCCGACGCAGAAAGCTAGTGAGATCGA
ACATCTACTGCCGCATCAGTGGATGCTGCGTAATTGCATGGACTTGACCACCCGTTTGCACTCGACTTGA

Protein sequence :
MDRFGKIHGMTSSPNLAQMTPEQLRALAAQLLSKVDTMARKIHRDETIIEQLSHEIAILKRHKFAKRSEQISPAQGSLLD
DLLNTDLEAIEAELNALRPAPTSDEPRQKPKRAPLPPQFPRTVIRHEPENTQCVCGCQLQRIGEDVSEKLDYTPGVFTVE
QHVRGKWACRQCETLIQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIPRSTLAQWVGQTGVQLQ
PLVDALREAVLAQRVVHADETPVQMLAPGEKKTHRAYVWAYCTTPYSALKAVVYDFSPSRAGEHARNFLGTWNGKLVCDD
FAGYKASFDLDITEIGCMAHARRKFFDLHAANKSQLAEQALHSIGGLYEVERQAKDMCDEERWRLRQEIAAPIAQKLHEW
MLAQRDLVPEGSATAKALDYSLKRWVALMRYLDDGAVPIDNNPVENTIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSA
RMNGHDPYAYLKDVLTRLPTQKASEIEHLLPHQWMLRNCMDLTTRLHST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 0.0 87
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 1e-137 52
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_0737 YP_004700198.1 ISPpu14, transposase Orf3 VFG1513 Protein 7e-63 41