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Name : PPS_0643 (PPS_0643) Accession : YP_004700106.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : Integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 737946 - 738827 bp Length : 882 bp Strand : + Note : - DNA sequence : GTGCGGCTGAAGTACGCCTTCATCAAGAAGCACTCGACGGATTACCCGGTGCGGCGCCTTTGCCAAACCCTCAAGGTGCA TCCCAGCGGCTACTACGCTTGGTTGGCGGAGCCTCAATCTGCCCGAGCAAAAGAAGATCATCGTCTGCTTGGTTTGATCA AACATGCTTGGCTCGAAAGCGGAGGTGTGTACGGCTATCGCAAAATTCATGGTGACCTGCGTGAGCTGGGAGAGACATGC GGGCGAAATCGAGTCGGTCGTTTGATGCAAGCAGAGGGGTTGCGTTCGCAAACGGGTTATCGCCGTCGTCCTGGGTTTTA TGGCGGAAAACCAACCGTGGCCTCGCCCAACCACCTTGCCCGGCAGTTCAAGGTCAGCGAGCCGAACAAGGTCTGGGTGA CAGATATCACTTACATCCGCACCTATGAAGGATGGCTTTATCTGGCGGTAGTGCTGGATCTCTTCTCACGCCAAGTAATT GGTTGGTCAATGAAGCCAAGGATGTGCAGCGACCTTGCTATCGACGCGATGCTGATGGCCGTTTGGCGACGCAAGCCACA GCAGCAAGTGATGATTCACTCAGACCAAGGCAGTCAGTTCAGTAGCTCAGATTGGCAAAGCTTCCTTAAGGCCAACAATG TGGTCAGCAGCATGAGCCGACGGGGAAACTGCCACGACAATGCCGTAGCCGAGAGCTTTTTCCAGCTTTTGAAGCGGGAA CGGGTTCGACGAAAGACCTACGCGACACGTGACGAAGCCCGGAGTGATATTTTCGATTACATCGAGATGTTCTATAACCC AAAACGTCGACACAGCAGTGCTATGCAGCTGTCTCCAGTAGAGTATGAGAAACGCTATTTCCTGAGCTTGGAGAGTGTCT AG Protein sequence : MRLKYAFIKKHSTDYPVRRLCQTLKVHPSGYYAWLAEPQSARAKEDHRLLGLIKHAWLESGGVYGYRKIHGDLRELGETC GRNRVGRLMQAEGLRSQTGYRRRPGFYGGKPTVASPNHLARQFKVSEPNKVWVTDITYIRTYEGWLYLAVVLDLFSRQVI GWSMKPRMCSDLAIDAMLMAVWRRKPQQQVMIHSDQGSQFSSSDWQSFLKANNVVSSMSRRGNCHDNAVAESFFQLLKRE RVRRKTYATRDEARSDIFDYIEMFYNPKRRHSSAMQLSPVEYEKRYFLSLESV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 2e-41 | 46 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 6e-42 | 46 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 5e-31 | 45 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 5e-31 | 45 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 6e-32 | 44 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 6e-32 | 44 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 4e-30 | 44 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 5e-30 | 44 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 6e-30 | 43 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 5e-30 | 43 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 3e-33 | 43 |
| tnpA | AAD44733.1 | TnpA | Not tested | SHI-2 | Protein | 6e-36 | 43 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 9e-48 | 41 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 5e-48 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPS_0643 | YP_004700106.1 | Integrase catalytic subunit | VFG1484 | Protein | 3e-32 | 44 |
| PPS_0643 | YP_004700106.1 | Integrase catalytic subunit | VFG0785 | Protein | 3e-30 | 43 |
