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Name : PPS_0617 (PPS_0617) Accession : YP_004700082.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 708446 - 710941 bp Length : 2496 bp Strand : + Note : - DNA sequence : ATGGATCACCCTGCCATCGAGCCGGTGCACCTGTTGCAGGCATTGCTCGAGCAGCAGGGCGGCTCGATCAAGCCGCTGCT GATGCAGGTAGGCTTCGACATCAACAGCCTGCGCCAGGCACTGGTGAAAGAACTCGACCAGCTGCCGAAAATCCAGAACC CCACCGGCGACGTGAACATGTCGCAGGACCTGGCGCGCCTGCTCAACCAGGCCGACCGCCTGGCCCAGCAGAAGGGCGAC CAGTTCATTTCCAGCGAACTGGTGTTGCTGGCTGCCATGGACGAGAACAGCAAGCTCGGCAAGCTGTTGTTGAGCCAGGG CGTGAGCAAGAAGGCCCTGGAAAACGCCATCAACAACCTGCGTGGCGGTGCGGCGGTCAATGACGCCAACGCCGAGGAAT CGCGCCAGGCGCTGGACAAGTACACCGTCGACCTGACCAAGCGTGCCGAAGAGGGCAAGCTGGACCCGGTGATTGGCCGT GACGACGAAATTCGCCGTACCGTACAGGTGCTGCAACGCCGTACCAAGAACAACCCGGTGCTGATCGGTGAGCCTGGCGT AGGTAAAACCGCCATCGCCGAAGGCCTGGCCCAGCGCATCATCAATGGTGAAGTGCCGGACGGCCTGAAGGGCAAGCGCC TGCTGGCGCTGGACATGGGCGCGCTGATTGCCGGTGCCAAGTACCGCGGCGAGTTCGAAGAACGCCTCAAAGGCCTGCTG AACGAGCTGTCCAAGCAGGAAGGCCAGATCATCCTGTTCATCGACGAACTGCACACCATGGTCGGCGCCGGCAAGGGCGA GGGCGCCATGGACGCCGGCAACATGCTCAAGCCGGCCCTGGCTCGTGGCGAGCTGCACTGCGTTGGCGCCACCACGCTGA ACGAGTACCGCCAGTTCATCGAAAAAGATGCTGCCCTGGAGCGCCGCTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAG GAAGACACCATCGCCATCCTGCGGGGCCTGAAAGAGCGTTATGAAGTGCACCACAAGGTGGCCATCACCGACGGCGCCAT CATTGCTGCGGCCAAGCTCAGCCACCGCTACATCACCGACCGTCAGCTGCCGGACAAGGCCATTGACCTGATCGACGAAG CGGCCAGCCGCATCCGCATGGAGATCGACTCCAAGCCGGAAGTGCTCGACCGCCTCGACCGTCGCCTGATCCAGCTGAAG GTGGAGTCGCAGGCGCTGAAGAAGGAAGAAGACGAAGCGGCGAAAAAGCGCCTGGAGAAGCTGACCGAGGAAATCGACCG GTTGGAGCGTGAATACGCCGACCTGGAAGAAATCTGGGCCTCCGAGAAGGCTGAGGTGCAGGGCTCGGCGCAGATCCAGC AAAAGATCGAGCAGGCCCGTCAGGAGCTGGAGACCGCCCGTCGCAAAGGCGACCTGAGCCGCATGGCCGAGCTGCAGTAC GGGGTGATCCCGGACTTGGAGCGCAGCCTGCAGATGGTCGACCAGCACGGCAAGACCGAAAACCAGTTGCTGCGTAACAA GGTGACCGAGGAAGAAATTGCCGAAGTGGTCTCGAAGTGGACCGGTATCCCGGTGGCCAAGATGCTCGAAGGCGAGCGTG AAAAGCTGCTGAAGATGGAAGAGCTGCTGCACCAGCGTGTGATCGGTCAGAACGAGGCGGTAACCGCCGTGGCCAACGCG GTGCGCCGTTCGCGTGCCGGGCTGTCCGACCCGAACCGGCCGAGTGGTTCGTTCCTGTTCCTCGGCCCGACCGGGGTGGG CAAGACCGAGCTGTGCAAGGCGCTGGCCGAGTTCCTGTTCGACACCGAAGAGGCAATGGTGCGCATCGACATGTCCGAGT TCATGGAGAAGCATTCCGTGGCTCGCCTGATCGGTGCCCCACCAGGCTATGTGGGGTATGAAGAGGGCGGTTACCTGACC GAGGCGGTACGGCGCAAGCCATACTCGGTGGTGCTGCTGGACGAGGTGGAGAAGGCCCACCCGGATGTGTTCAACGTGCT GCTGCAGGTGCTGGAAGACGGCCGCCTGACCGACAGCCACGGGCGCACCGTGGACTTCCGCAACACCGTGATTGTGATGA CCTCCAACCTGGGCTCGGCGCAGATCCAGGAACTGGTGGGTGACCGCGAGGCACAGCGTGCGGCGGTGATGGATGCGGTG GGTTCGCACTTCCGTCCGGAATTCATCAACCGTATCGACGAAGTGGTGGTGTTCGAGCCACTGGGCCGCGAGCAGATTGC CGGCATTACCGAAATCCAGCTGGGCCGCCTGCGCAGCCGTCTGCTGGAGCGCGAACTGTCGCTGAGCTTGAGCCCGGAGG CGTTGGACAAGCTGATTGCCGTGGGTTACGACCCGGTATACGGCGCACGGCCACTGAAGCGTGCGATCCAGCGCTGGATC GAGAACCCGCTGGCGCAGTTGATCCTGGCAGGCAAGTTCATGCCGGGCACGGCGATTACCGCCAAGGTGGAAGGCGACGA AATCGTCTTCGGCTGA Protein sequence : MDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINSLRQALVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGD QFISSELVLLAAMDENSKLGKLLLSQGVSKKALENAINNLRGGAAVNDANAEESRQALDKYTVDLTKRAEEGKLDPVIGR DDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLL NELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSE EDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLK VESQALKKEEDEAAKKRLEKLTEEIDRLEREYADLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQY GVIPDLERSLQMVDQHGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQNEAVTAVANA VRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLT EAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQELVGDREAQRAAVMDAV GSHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWI ENPLAQLILAGKFMPGTAITAKVEGDEIVFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-149 | 45 |
