Gene Information

Name : PPS_5229 (PPS_5229)
Accession : YP_004704636.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : Tn501 transposition resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 5928504 - 5929064 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence :
GTGCAGGGGCACCGCATCGGCTACGTCCGGGTCAGCAGCTTCGACCAGAACCCGGAACGCCAGCTGGAACAGACACAGGT
GAGCAAGGTGTTCACCGACAAGGCATCGGGCAAGGACACCCAGCGCCCCCAGCTCGAAGCGCTGCTGAGCTTCGTCCGCG
AAGGCGATACAGTGGTGGTGCACAGCATGGACCGGCTGGCCCGCAACCTCGATGACCTGCGTCGCTTGGTACAGAAGCTG
ACTCAACGCGGCGTGCGCATCGAGTTCCTGAAGGAGGGCCTGGTGTTCACTGGCGAGGACTCGCCGATGGCCAACCTGAT
GCTGTCGGTGATGGGGGCCTTCGCTGAGTTCGAGCGCGCCCTGATCCGCGAGCGGCAGCGTGAGGGCATCACCTTGGCCA
AGCAGCGTGGCGCGTACCGGGGCCGCAAGAAAGCCCTGTCCGATGAGCAGGCTGCTACCCTGCGGCAGCGAGCGACGGCC
GGCGAGCCCAAGGCGCAGCTTGCCCGCGAGTTCAACATCAGCCGGGAAACCCTCTACCAGTACCTCCGCACGGACGACTG
A

Protein sequence :
MQGHRIGYVRVSSFDQNPERQLEQTQVSKVFTDKASGKDTQRPQLEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKL
TQRGVRIEFLKEGLVFTGEDSPMANLMLSVMGAFAEFERALIRERQREGITLAKQRGAYRGRKKALSDEQAATLRQRATA
GEPKAQLAREFNISRETLYQYLRTDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 4e-72 94
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 6e-64 83
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 5e-63 82
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 4e-63 82
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 4e-63 82
res YP_005124341.1 DNA-invertase Not tested Not named Protein 4e-24 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_5229 YP_004704636.1 Tn501 transposition resolvase VFG1030 Protein 2e-63 82