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Name : PPS_5228 (PPS_5228) Accession : YP_004704635.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : Tn501 transposition transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 5925534 - 5928500 bp Length : 2967 bp Strand : - Note : - DNA sequence : ATGCCGCGTCGCTTGATCCTCTCGGCCACGGAGCGGGGCACCCTGCTCGCGTTGCCAGAAAGCCAGGATGACCTGATCCG CTACTACACCTTCAACGACTCCGACCTGTCGCTGATCCGTCAGCGGCGCGGCGACGCCAACCGCCTCGGCTTCGCCGTGC AACTCTGCCTGCTGCGCTACCCCGGCTATGCGTTGGGCACTGACAGCGAGCTGCCCGAACCGGTCATCCTGTGGGTGGCC AAGCAAGTCCAGACCGATCCGGCGAGTTGGACGAAGTACGGCGAGCGCGATGTGACCCGTCGCGAGCACGCCCAGGAACT GCGCACCTACCTTCAACTGGCCCCGTTCGGCCTGTCCGACTTCCGCGCCCTGGTGCGCGAGCTGACCGAACTGGCCCAGC AGACCGACAAGGGCTTGCTGCTGGCCGGCCAGGCGCTGGAGAGCCTGCGGCAGAAGCGACGCATCCTGCCGGCGTTGAGC GTGATCGACCGGGCTTGCTCGGAGGCCATTGCACGGGCCAATCGGCGGGTCTACCGCGCCCTGGTTGAACCGCTCACGGA CTCGCATCGGGCCAAGCTGGACGAGCTGTTGAAGCTCAAGGCCGGCAGCAGCATCACCTGGTTGACCTGGCTGCGCCAGG CACCGCTGAAACCCAACTCTCGGCACATGCTTGAGCACATCGAGCGGCTGAAGACATTTCAGCTGGTGGACTTGCCCGAA GTCCTGGGCCGGCACATCCACCAGAACCGCCTGCTCAAGCTGGCCCGCGAGGGTGGGCAGATGACGCCCAAAGACCTCGG CAAGTTCGAGCCGCAGCGGCGCTATGCGACCCTGGCCGCCGTGGTGCTGGAGAGCACTGCAACCGTGATTGATGAGCTGG TGGATCTGCACGACCGCATCCTAGTCAAGCTGTTCAGCGGCGCGAAGCACAAGCATCAGCAGCAGTTCCAGAAGCAGGGC AAGGCGATCAACGACAAGGTGCGCCTGTACTCCAAGATCGGCCAGGCGCTGCTGGAGGCCAAGGAAGCCGGCAGCGACCC CTATGCCGCCATCGAGGCGGTGATCCCCTGGGACGAGTTCACCGAGAGCGTCAGCGAAGCCGAGCTGCTGGCCCGGCCGG AGGGCTTCGACCACCTGCACCTGGTCGGCGAGAACTTCGCCACCCTGCGCCGCTACACGCCGGCTCTGCTGGAGGTATTG GAGCTGCGCGCCGCCCCGGCCGCGCAGGGCGTGCTGGCAGCCGTGCAGACGCTGCGCGAGATGAACGCCGACAACCTGCG CAAGGTGCCGGCCGATGCTCCCACCGCCTTCATCAAGCCGCGCTGGAAGCCACTGGTGATCACCCCGGAAGGCCTCGACC GGCGCTTCTACGAAATCTGCGCCCTGTCCGAGCTGAAGAACGCCCTGCGCTCCGGCGACATCTGGGTCAAGGGCTCGCGG CAGTTCCGCGACTTCGACGACTACCTGTTGCCGGCCGAGAAGTTCGCCGCGCTCAAGCGGGAACAGGCCCTGCCGCTGGC GATCAACCCGAACAGCGACCAGTATCTGGAAGAGCGCTTGCAGCTGCTGGACGAGCAGTTGGCCACTGTCGCCCGCCTGG CCAAGGACAACGAGCTGCCCGATGCCATCCTCACCGAGTCCGGGTTGAAGATCACCCCGCTGGATGCGGCGGTGCCGGAT CGGGCGCAGGCGCTGATCGACCAGACCAGTCAGTTACTGCCGCGCATCAAGATCACCGAACTGCTGATGGACGTGGACGA CTGGACGGGCTTCAGCCGCCACTTCACCCACCTGAAGGACGGGGCCGAGGCCAAAGACCGGACGTTGCTGCTGTCCGCGA TCCTCGGTGATGCGATCAACCTCGGGCTGACCAAGATGGCCGAGTCGAGCCCCGGTCTGACCTACGCCAAGCTGTCCTGG CTGCAAGCCTGGCACATCCGCGACGAGACCTATTCGGCGGCCCTGGCCGAGCTGGTCAACCACCAGTACCAGCATGCCTT CGCCGCCCACTGGGGCGACGGCACCACCTCATCCTCCGATGGCCAGCGTTTCCGGGCTGGCGGCCGGGGCGAGAGCACCG GACACGTCAACCCGAAGTACGGCAGTGAGCCGGGACGGCTGTTCTACACCCATATCTCCGACCAGTACGCGCCGTTCAGC ACCCGCGTGGTGAATGTCGGCGTGCGCGATTCCACCTATGTGCTCGACGGCCTGCTGTACCACGAGTCCGACCTGCGGAT CGAGGAGCACTACACCGACACGGCCGGCTTCACCGATCACGTCTTCGCCCTGATGCACCTGCTGGGCTTCCGTTTCGCGC CGCGCATCCGCGACCTCGGCGAAACCAAGCTGTACGTGCCGCAGGGCGTGCAGACCTACCCGACGCTGCGGCCGCTGATC GGCGGCACCCTGAACATCAAGCACGTCCGCGCCCATTGGGACGACATCCTGCGCCTGGCCAGCTCGATCAAACAGGGCAC CGTCACTGCCTCGCTGATGCTGCGCAAGCTCGGCAGCTATCCGCGCCAGAACGGCCTGGCCGTGGCCCTGCGCGAGCTGG GCCGGATCGAACGCACGCTGTTCATCCTAGACTGGCTGCAAAGTGTTGAGCTGCGCCGCCGCGTGCATGCCGGCCTGAAC AAAGGTGAGGCGCGCAACTCGCTGGCCAGGGCGGTGTTCTTCAACCGCCTTGGGGAAATCAGGGATCGGAGCTTCGAGCA GCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGGCGGCTATCGTGCTGTGGAACACGGTGTACCTGGAGCGCGCCA CCCAGGGGTTGGTCGAGGCCGGCAAGCCGGTGGACGGCGAGCTGCTGCAATTCCTGTCGCCGCTGGGCTGGGAGCACATC AACCTCACCGGCGATTACGTCTGGCGGCAGAGCCGCAGACTGGAAGACGGGAAGTTTCGGCCCCTACGGATGCCCGGAAA ACCTTAG Protein sequence : MPRRLILSATERGTLLALPESQDDLIRYYTFNDSDLSLIRQRRGDANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVA KQVQTDPASWTKYGERDVTRREHAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALS VIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKPNSRHMLEHIERLKTFQLVDLPE VLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYATLAAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQG KAINDKVRLYSKIGQALLEAKEAGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRYTPALLEVL ELRAAPAAQGVLAAVQTLREMNADNLRKVPADAPTAFIKPRWKPLVITPEGLDRRFYEICALSELKNALRSGDIWVKGSR QFRDFDDYLLPAEKFAALKREQALPLAINPNSDQYLEERLQLLDEQLATVARLAKDNELPDAILTESGLKITPLDAAVPD RAQALIDQTSQLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLSAILGDAINLGLTKMAESSPGLTYAKLSW LQAWHIRDETYSAALAELVNHQYQHAFAAHWGDGTTSSSDGQRFRAGGRGESTGHVNPKYGSEPGRLFYTHISDQYAPFS TRVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPQGVQTYPTLRPLI GGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLN KGEARNSLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATQGLVEAGKPVDGELLQFLSPLGWEHI NLTGDYVWRQSRRLEDGKFRPLRMPGKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EXA24 | ABD94633.1 | truncated Tn1721 tranposase | Not tested | ExoU island A | Protein | 0.0 | 97 |
| tnpA | ACY75538.1 | TnpA | Not tested | Tn6060 | Protein | 0.0 | 97 |
| EC042_4089 | YP_006098372.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 74 |
| tnpA | ACF06153.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 73 |
| tnpA | AAL08440.1 | transposase TnpA | Not tested | SRL | Protein | 0.0 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPS_5228 | YP_004704635.1 | Tn501 transposition transposase | VFG1031 | Protein | 0.0 | 72 |
