Gene Information

Name : PPS_5220 (PPS_5220)
Accession : YP_004704627.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 5918316 - 5919377 bp
Length : 1062 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAAAAGCCGACTTTCCTTTCTAGACCGCTACCTGACGGTGTGGATCTTTCTGGCCATGGGCCTGGGCATTGGTCT
GGGCAGCCTGTTCCAGGGATTGCCTGCGTGGCTGAATAGCCTGTCGGTAGGCTCGACAAACATCCCCATCGCCATTGGCC
TCATCGTAATGATGTACCCACCTCTGGCGAAGGTGAAATACGAGGAGTTGCCACAGGTATTCAAGGACAAGCGCATCCTT
GCCCTGTCGCTGATCCAGAACTGGGTGATCGGCCCGGTCCTGATGTTCGGGCTGGCCGTTGTCTTCCTTTCCGACAAGCC
TGAGTACATGACCGGCCTGATCCTCATCGGCTTGGCACGCTGCATCGCCATGGTGCTGGTGTGGAACCAGATCGCCGGTG
GCAACAACCAGTACGTGGCGGGTCTGGTCGCCTTCAACAGCATTTTCCAGATCCTGTTCTTTAGCGTGTACGCCTGGATC
TTCCTGGGGCTGTTGCCGCCGCTGTTTGGCCTTGAAGGTAGCGTCATTGAGACCAGCTTCCTCGATATCGCCCAATCGGT
GCTGATCTACCTGGGCATCCCGTTCCTGGCTGGTTTCCTGACCCGCAAGATCCTGATCAGCAGCAAGGGCGAGACCTGGT
ACCAGGAGCGATTCATCCCGAAGATCAGCCCGCTGACCCTTGTGGCGTTGCTGCTGACCATCGTCGCCATGTTCAGCCTG
AAAGGCGACATGGTGCTGCAACTGCCGCTGGATGTGCTGCGCATCGCTATCCCGCTGACCATCTACTTCGTGGTGATGTT
CTTCATCAGCTTCTGGATGGGCAAGCTGTTGGAAGCTGACTACCCACGTACCACGGCGCTGGCGTTCACTGCAGCGAGCA
ACAATTTCGAACTGGCCATTGCCGTGGCCATCGCCACCTTCGGCCTTGCCTCGCCGGTCGCGTTTGCCACCGTCATCGGG
CCCTTGGGGGAAGTGCCGGTACTGATCTCCCTGGTGGGCGTGGCCTTGTGGCTCAAGCGCCGCTGGTTCGATCAGCCATC
TGGCGCCTTGACTCAGGAGTAA

Protein sequence :
MSKSRLSFLDRYLTVWIFLAMGLGIGLGSLFQGLPAWLNSLSVGSTNIPIAIGLIVMMYPPLAKVKYEELPQVFKDKRIL
ALSLIQNWVIGPVLMFGLAVVFLSDKPEYMTGLILIGLARCIAMVLVWNQIAGGNNQYVAGLVAFNSIFQILFFSVYAWI
FLGLLPPLFGLEGSVIETSFLDIAQSVLIYLGIPFLAGFLTRKILISSKGETWYQERFIPKISPLTLVALLLTIVAMFSL
KGDMVLQLPLDVLRIAIPLTIYFVVMFFISFWMGKLLEADYPRTTALAFTAASNNFELAIAVAIATFGLASPVAFATVIG
PLGEVPVLISLVGVALWLKRRWFDQPSGALTQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 3e-82 71
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 5e-106 71
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 4e-106 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_5220 YP_004704627.1 arsenical-resistance protein BAC0573 Protein 3e-103 65
PPS_5220 YP_004704627.1 arsenical-resistance protein BAC0004 Protein 1e-74 52