|
Name : PPS_0511 (PPS_0511) Accession : YP_004699976.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 588371 - 589507 bp Length : 1137 bp Strand : + Note : - DNA sequence : GTGATCATGCCCAGCCAAGCTGCCATCCTCGACGCCCACTACATGGCCCGCGCGCTGGAGCTGGCGCGCAAGGGCCTGTA CACCACCCACCCGAACCCGCGCGTAGGCTGCGTGATCGTGCGCGATGGCGAGGTGGTCGGCGAAGGCTGGCATGTACGCG CCGGCGAGCCGCATGCCGAAGTGCATGCGCTGCGCCAGGCCGGTGAGCGTGCCCGTGGCGCCTGTGCCTATGTCACCCTC GAGCCGTGCAGCCATCACGGCCGCACGCCGCCGTGCGCCGAAGCGCTGGTCAAGGCAGGCGTGGCACGGGTGGTAGCCGC CATGCAGGACCCCAACCCGCAAGTGGCGGGGCAGGGCCTGCGGCGCCTGGCCGAGGCCGGTATCGAAGTGGCCAGCGGCG TGCTCGAGGCCGAGGCCCGCGCACTCAACCCCGGTTTCCTCAAACGCATGGAACATGGCCTGCCGTTCGTTCGCGCCAAG CTGGCCATGAGCCTGGATGGCCGCACCGCCATGGCCAGTGGCGAAAGCCAGTGGATCACCGGCCCGGCCGCCCGTTCGGC GGTGCAGCGCCTGCGCGCCCGCTCCAGCGTGGTACTGACCAGCGCCACCAGCGTGTTGGCCGACAACGCGCGGATGACCG TGCGCGGCGCCGAGCTGGGCCTGGATGCCGAAACCACTGCCCTGGCTCTCAGCCGCACACCGCTGCGCGTGCTGATCGAT GGCCACCTGCGCCTGCCGCTGGATGCGCCGTTCTTCCAGGCTGGCCCGGCGCTGGTGGTGACCGCTGTCGCAGATGACCC GCGCTATGCCGCTGCCGGCCACGAACTGCTCAGCTTGCCGGGTGACAATGGCCAGGTAGACCTGTCGGCGTTGCTGCAGG CCCTGGCGGCCCGCAGCATCAACGAAGTCCTGCTGGAAGCCGGTGCCGGCCTGGTCGGCGCCTTCGCCCGGCAAGGCCTG ATCGACGAGTACCAACTGTTCGTCGCCGGCACTTTCCTTGGTTCCCAGGCTCGTCCGCTGTTGGACTGGCCACTGGACAA GATGAGCGAAGCGCCGCGGCTGAAAATTACTGAAATGCGCGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCCCTGC CGGCACCCCGCGTATAA Protein sequence : MIMPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGERARGACAYVTL EPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAK LAMSLDGRTAMASGESQWITGPAARSAVQRLRARSSVVLTSATSVLADNARMTVRGAELGLDAETTALALSRTPLRVLID GHLRLPLDAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLSALLQALAARSINEVLLEAGAGLVGAFARQGL IDEYQLFVAGTFLGSQARPLLDWPLDKMSEAPRLKITEMRAVGDDWRVTAIPLPAPRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-60 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-60 | 49 |
