Gene Information

Name : PPS_4988 (PPS_4988)
Accession : YP_004704395.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 5663284 - 5663745 bp
Length : 462 bp
Strand : +
Note : -

DNA sequence : 
TTGCTGGAGAATTTCGTGATGAAGATCGGAGAACTGGCCAAAGCCACCGACTGCGCCGTGGAAACCATCCGCTACTACGA
GCGTGAACAGCTGCTGCCGGAGCCGGCGCGCAGCGACGGCAACTACCGGCTGTACACCCAGGCCCACGTCGAGCGGCTGA
CGTTCATCCGCAACTGCCGCACCCTGGACATGACCCTGGATGAAATCCGCAGCCTGCTACGCCTGCGCGACAGCCCCGAT
GATTCGTGCGGCAGCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTGCAGGCGCGGATCGATGGATTGGTGGCGTT
GCAGGAGCAGTTGGTGGAGCTGCGGCGGCGCTGCAATGCGCAAGGGGCGGAGTGTGCGATCTTGCAGCAACTGGAGACGA
ACGGGGCGGTATCGGTGCCGGAAACCGAGCATTCGCATGTAGGGCGAAGCCACGGGCATTAA

Protein sequence : 
MLENFVMKIGELAKATDCAVETIRYYEREQLLPEPARSDGNYRLYTQAHVERLTFIRNCRTLDMTLDEIRSLLRLRDSPD
DSCGSVNALIDEHIEHVQARIDGLVALQEQLVELRRRCNAQGAECAILQQLETNGAVSVPETEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 4e-36 55
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 5e-32 49
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 4e-32 49
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 6e-32 49
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 4e-32 49
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-32 49
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-32 49
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-32 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_4988 YP_004704395.1 MerR family transcriptional regulator BAC0058 Protein 8e-65 100
PPS_4988 YP_004704395.1 MerR family transcriptional regulator BAC0301 Protein 2e-34 58