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Name : PPS_4039 (PPS_4039) Accession : YP_004703460.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : ISPsy20, transposase IstA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 4565071 - 4566579 bp Length : 1509 bp Strand : + Note : - DNA sequence : GTGATCAGCATGGAAATGATGGGCAAAATTCGGCGGATGTATTTCCGCGACAAGCTGTCGTTGCATGAGATAGCCAAGCG CACCGGACTGTCGCGCAACACCATCCGAAAATGGGTCAGAGCGCCGGAGTCCAAACAGCCGGTTTATCAGCGTCGAGCCG TGTTCAACAAGCTCAGTCCCTTTCACGAGATGTTGGAGCAAGCGCTGCGGGCTGATGCCTTAAGGGCCAAGCAACATCGT CGCAGTGCCAAGGCGCTGCTGGCCATGATCCGCGCTGAAGGCTATGACGGCGGCTACAGCCAGCTCACTGCCTTCGTTCG TCATTGGCGCGGAGAGCAAGGCAAGGCGGTACGGGCATTTGTGCCGTTGGCATTCGCCTTGGGCGAGGCCTTCCAGTTCG ATTGGAGCGAGGAAGGCCTGCTGGTTGGCGGTGTTTTCAGGCGCGTCCAGGTCGCGCACATGAAGCTATGTGCCAGCCGA GCTTTCTGGCTAGTGGCCTATCCCAGCCAAGGGCATGAAATGCTGTTCGATGCCCATACCCGCTCATTCGCCGCCTTAGG TGGCGTGCCGCGTCGCGGCATCTACGACAACATGAAAACTGCGGTCGACAAGGTCTCCAAGGGTAAAGGCCGCACGGTCA ATGCTCGCTTCATGGTGATGTGCTCGCACTACCTGTTCGACCCGGACTTCTGCAACGTAGCGTCCGGCTGGGAAAAAGGT ATCGTCGAAAAGAATGTCCAAGACAGTCGGCGCCGCATCTGGCTGTCCGCCCGCGACAATACTTTCCATAGCTTCGAAGA GTTGAATGCCTGGCTTGCCCAGCGCTGCCGGGCTCTCTGGCATGAGCTGATTCATCCGCAGTACAACGGCCTTACCGTCG CAGAAGTCTTGGAATTGGAGCGCGTCGAAATGATGCCGATGCCGACGCCTTTCGACGGATATGTAGAACGCACGGTTCGC GTTTCCAGCACCTGTCTGATCAACGTGGCTCGCAACCGCTATTCAGTACCCTGTGAGCGTGTTGGCCAGTGGGTCAGCAG TCGGCTCTATCCCTCGCGAATCGTCGTGATTGCCGATGAGGGTGTGATTGCTAGCCATGAGCGCCTGTTTGATCGCGATC AGGTCAGCTACGACTGGCAACACTACATCCCCCTCATTGAACGCAAACCGGGGGCCCTACGCAATGGTGCCCCGTTTGCC GATCTGCCTAAGCCACTACGCCTGCTCAGGCGCGGGCTGCTGCGGAATCTACAGGGTGACCGGGTTATGACCCAGGTCTT GGCCGCCGTGCCCATCGCTGGCCTGGATGCTGTTCTCGTAGCGGTTGAGCTGGTTTTGGAGTCTGGCAGCCTGAGCGCTG ACCACATCCTCAACATCGTGGCCCGTCTGACCGCTCGTGAAGCACCACCCTCGGTCGAAACCAACCTGCAACTGAACGTT ACCCCTGTTGCCAATACCGCACGCTATGACCGGTTGCGCAGCACGGATGAGGAGGTGCGCAATGCGTGA Protein sequence : MISMEMMGKIRRMYFRDKLSLHEIAKRTGLSRNTIRKWVRAPESKQPVYQRRAVFNKLSPFHEMLEQALRADALRAKQHR RSAKALLAMIRAEGYDGGYSQLTAFVRHWRGEQGKAVRAFVPLAFALGEAFQFDWSEEGLLVGGVFRRVQVAHMKLCASR AFWLVAYPSQGHEMLFDAHTRSFAALGGVPRRGIYDNMKTAVDKVSKGKGRTVNARFMVMCSHYLFDPDFCNVASGWEKG IVEKNVQDSRRRIWLSARDNTFHSFEELNAWLAQRCRALWHELIHPQYNGLTVAEVLELERVEMMPMPTPFDGYVERTVR VSSTCLINVARNRYSVPCERVGQWVSSRLYPSRIVVIADEGVIASHERLFDRDQVSYDWQHYIPLIERKPGALRNGAPFA DLPKPLRLLRRGLLRNLQGDRVMTQVLAAVPIAGLDAVLVAVELVLESGSLSADHILNIVARLTAREAPPSVETNLQLNV TPVANTARYDRLRSTDEEVRNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 0.0 | 86 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 2e-99 | 48 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 7e-83 | 43 |
