Gene Information

Name : PPS_3988 (PPS_3988)
Accession : YP_004703409.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : amino acid ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 4507483 - 4508835 bp
Length : 1353 bp
Strand : +
Note : -

DNA sequence :
ATGCAGCCTGACCACAGCGCTTCCGGCAACGGCCAACTCCGTAAAACCCTGCGTCTCTGGCACGTGATCATCATCGGTCT
GGCCTACCTGACCCCGATGACCGTGTTCGACACCTTCGGTATCGTTTCCGGGATTACTGCCGGCCACGTACCCAGCGCCT
ACATCCTGGCACTGGCCGGGATCCTGTTCACCGCCGTGAGCTACGGCACCTTGGTAAGGCGCTTCCCGCAGTCGGGCTCG
GCCTATACCTACACCCAGCGCGCGATCAACCCGCACGTCGGCTTCCTGGTCGGCTGGTCGTCGTTGCTGGACTACCTGCT
GCTGCCAATGGTCAACGCCTTGCTGGCCAAGCTGTACCTTTCAGCCATGTTCCCGGAAGTACCGGAGTGGATGTGGGTGG
CTGGCTTCGTCACCCTGATCAGCCTGATCAACATGCGCAGCGTGAACCTGGTGGCGCACTTCAACCTGCTGTTCGTGGCC
GTGCAGGTGGCGATCATCGCCGTGTTCATCTACCTGTGCGTGCGCGGCCTGGACCAGGGTGAAGGGCTAGGTACCGCCTG
GAGCCTGCTGCCGTTCGCCGACAATCAGACCCAGCTCAGCGCCCTGGCCGCCGGTGCGACTATCCTGTGCTTCTCGTTCC
TCGGCTTCGACGCGGTGACCTGCCTGTCCGAAGAAACCCGCGACCCGGGCAAGACCATCCCTCGCGCGATCTTCCTCACC
GCCCTGATTGGCGGCCTGGTGTTCATCACCGTGTCGTACTTCATCCAGGCCTACTTCCCGACCATGTCCCGCTTCCACGA
CCAGGAAGCGGCACTGCCGGAAATCGCCCTGTACGTCGGCGGCAAGCTGTTCCAGTCGATCTTCATCGCCTGCACCGTGA
TCAACACCATCGCCTCGGGCCTGGCCTCGCAGACCAGCGTGTCGCGCCTGCTGTACGTGATGGGCCGCGACAATGTGATC
CCGGCCAGCCTGTTCGCCCGCCTGCACTCGCGTTACAAGACGCCAGTGCTGAATATTGCGGTGGTGGGGCTGATTTCGCT
GTCGGCGATCTTCTTCGACCTGGTTACCGCCACCTCGATCATCAACTTCGGTGCACTGGTCGCGTTCAGCTTCGTCAACC
TGTCGGTGATCAACCACTGCTATCTGCGTGAAGGCAGGCGCCAGGGACTTGCCAACCAGCTGACGTACCTGGTGGCCCCG
ACCATCGGCTTTTGCATCATCGTCTCGCTGTGGCTGGACCTGAACGCACATTCGCTGCTGTTCGGTGGCGTCTGGGCACT
GCTCGGCCTGCTGTACCTGGCCTGGCTGACCAAAGCCTTCAGGGACTCCCCACCCAACTACATCGCTGAATGA

Protein sequence :
MQPDHSASGNGQLRKTLRLWHVIIIGLAYLTPMTVFDTFGIVSGITAGHVPSAYILALAGILFTAVSYGTLVRRFPQSGS
AYTYTQRAINPHVGFLVGWSSLLDYLLLPMVNALLAKLYLSAMFPEVPEWMWVAGFVTLISLINMRSVNLVAHFNLLFVA
VQVAIIAVFIYLCVRGLDQGEGLGTAWSLLPFADNQTQLSALAAGATILCFSFLGFDAVTCLSEETRDPGKTIPRAIFLT
ALIGGLVFITVSYFIQAYFPTMSRFHDQEAALPEIALYVGGKLFQSIFIACTVINTIASGLASQTSVSRLLYVMGRDNVI
PASLFARLHSRYKTPVLNIAVVGLISLSAIFFDLVTATSIINFGALVAFSFVNLSVINHCYLREGRRQGLANQLTYLVAP
TIGFCIIVSLWLDLNAHSLLFGGVWALLGLLYLAWLTKAFRDSPPNYIAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01507.1 putative amino acid/amine transport protein Not tested PAGI-1 Protein 9e-69 42