|
Name : PPS_3945 (PPS_3945) Accession : YP_004703366.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : integrase catalytic protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4461522 - 4462310 bp Length : 789 bp Strand : + Note : - DNA sequence : ATGGTGGGGTTGGCACGCAGTACCTTTTATTACCAGATCAAGTGCCAGCAAAAGCCGGACAGGCACGCCTCGCTCAAGGA GTTGGTGCAGCGTGTCTATCACGAGGAGAAAGGGCTGTATGGCTACCGCCGCATTGCCCTTGCCATCAGGAATCAGGGGA CCTTGGTCAACAAGAAGGTCATTGAACGGTTGATGGCTGAGCTTGGTTTGCAGTCCGTTGTACGCCCGAAGAAGTATCGA TCCTATCGCGGCATTGTCGGCAAGGTGGCAATGAATTTGCTGGAGCGTAATTTCGTCGCGCAACGCCCCAACCAGAAGTG GGCGACCGATGTCACTGAGTTCAAAGTGGCCCAACAAAAGCTCTACCTGTCGCCCGTGATGGACTTGTACAACGGTGAGA TCATCGCCTATGAAACAGCTTGCCGGCCTACTTATGGCTTGGTCGGGAACATGCTGGAAAAGGCGCTCGATGGGTTGGGT GAAAAGCCCAAGCTAGTGATCCACTCAGACCAAGGATGGCATTACCAGCAGCCCCAATACCGCCATAAGCTCGCAGCGCG CGGTGTGAAGCAGAGCATGTCTCGCAAGGGCAATTGTCTGGATAATGCAGCGATGGAAAGCTTCTTCGGCACACTGAAGT CAGAGTTCTTCTACCTGAAGCGCTTTGAAAGCGTCGAACAGCTGAAGGCGGGCCTGGAGGAGTACATCCATTACTACAAC CATGACCGCATCAGGCTGAAACTCAATGGCCTGAGCCCTGTCAGCTACAGGACTCAGGCCACTGGCTAA Protein sequence : MVGLARSTFYYQIKCQQKPDRHASLKELVQRVYHEEKGLYGYRRIALAIRNQGTLVNKKVIERLMAELGLQSVVRPKKYR SYRGIVGKVAMNLLERNFVAQRPNQKWATDVTEFKVAQQKLYLSPVMDLYNGEIIAYETACRPTYGLVGNMLEKALDGLG EKPKLVIHSDQGWHYQQPQYRHKLAARGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKRFESVEQLKAGLEEYIHYYN HDRIRLKLNGLSPVSYRTQATG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 2e-71 | 52 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 5e-71 | 51 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 1e-58 | 50 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 1e-58 | 50 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 1e-54 | 47 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 9e-54 | 46 |
