Gene Information

Name : PPS_3619 (PPS_3619)
Accession : YP_004703042.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4077347 - 4078030 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGCATCTGCGCCGGCCTTACCGCCCAGGGCCTGACCGT
GGACCGTGTGGGCAACGCCGCCGATGCACGGGCGATGCTGCAGGCCGCGCAGTTCGACGTGATGATCCTCGACCTTGGCC
TGCCCGACGAAGACGGCCTGAAGCTGTTGCGCCGCCTGCGCGAGAAAGGCGAGACGCTGCCAGTGCTGGTGCTCACTGCC
CGTGATGCGGTTACCGACCGGGTCGATGGCCTGCAGGCCGGCGCCGACGACTACCTGCTCAAACCGTTCGACCTGCGCGA
GCTGGCTGCTCGCCTGCACACCCTGCTGCGGCGCGTAGCCGGGCGGGCGGTGAATGTGATCGAACACGGCCCGCTGCGCT
ACGACCCGAGCAGCTGCGAGGCAACCCTGGCCGGCCAGCCGGTCGACCTGTCCCGGCGTGAACAGGCATTGCTCCAGGCG
CTGCTGCAGAACCCCGGGCGGGTGCTGTCCAGCGAGCAGCTCAAAGACTGCGTGTACGGCTTCAGCGACGAAGTCGAGAG
CAATGCCCTGAACGTGCATATCCATCATCTGCGGCGCAAGCTGGGCAACGGCATCGTCGAGACCGTGCGCGGCCTGGGCT
ACCGGCTGGGCCCGGCGCAAGCACCGGAGGAGGCGGCATCATGA

Protein sequence : 
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAADARAMLQAAQFDVMILDLGLPDEDGLKLLRRLREKGETLPVLVLTA
RDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGQPVDLSRREQALLQA
LLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPAQAPEEAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-49 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_3619 YP_004703042.1 two component transcriptional regulator BAC0487 Protein 1e-26 43
PPS_3619 YP_004703042.1 two component transcriptional regulator CP000647.1.gene1136. Protein 2e-20 41
PPS_3619 YP_004703042.1 two component transcriptional regulator NC_002516.2.879194.p Protein 4e-24 41
PPS_3619 YP_004703042.1 two component transcriptional regulator BAC0530 Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_3619 YP_004703042.1 two component transcriptional regulator VFG1389 Protein 4e-21 44
PPS_3619 YP_004703042.1 two component transcriptional regulator VFG0473 Protein 3e-30 43