Gene Information

Name : PPS_3562 (PPS_3562)
Accession : YP_004702985.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : potassium-transporting, ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : -
Position : 4011789 - 4013489 bp
Length : 1701 bp
Strand : -
Note : -

DNA sequence :
GTGGCCATGCACAGTTACGACTTCGCCTTGCTGTTGGCATTTTTCGCCATCGTGCTGCTACCAGCACCCTGGCTCGGGCG
GTTCTACTTCAAGGTCATGGAAGGCCAGCGCACCTGGCTGTCGCCCGTGCTGGGCCCGGTCGAGCAAGCCTGCTACCGGC
TGGCGGGCGTGGGCACCAGCCAGGAACAGAACTGGCAGCAGTACACCTTGGCTCTGCTGGCCTTCAACCTGGCCGGGTTC
CTGCTGCTGTTCGCCGTGCTGCTGTTGCAGGGCTACCTGCCATTCAACCCGCAGCATCTGCCCGGCCAGGAATGGTCGCT
GGCGTTCAACACCGCGGTCAGCTTCGTAACCAACACCAACTGGCAGGCCTACAGCGGTGAAGCGTCGGTCAGCTACCTGA
GCCAGATGCTCGGCCTGACCGTGCAGAACTTCGTCAGCGCCGCCACCGGCCTGGCCGTGCTGGTCGCCCTGTGCCGCGGC
ATCGCCCGGCGCAGCGCCACGACGCTGGGCAACTTCTGGGTCGACATGACCCGCGCCACCCTCTACGGCTTGCTGCCGCT
GTGCCTGCTGCTGGCGTTGCTGCTGGTATGGCAGGGCGTACCGCAAACCTTGGCCGACTACGCCCACGCGGTCACCCTGC
AAGGCACCGAGCAGACCATCCCGCTGGGCCCGGCCGCCAGCCAGATCGCCATCAAGCAACTGGGTACCAACGGCGGTGGC
TTCTTCGGGGTCAACTCGGCGCACCCGTTCGAAAACCCCACGGCCTGGAGCAACCTGTTCGAGGTAGCCTCGATCATCCT
CATTCCGGTGGCGCTGGTGTTCACCTTTGGCCACTACGTGAAGGACCTGCGCCAGAGCCGCGCAATCCTCGCCTGCATGC
TGGCCCTGTTCCTGATCGGCGGCAGCACGGCATTGTGGTCCGAGTACCAGCCCAACCCGGCCCTCGAGAGCGCGCAGGTA
CAGCAAAGCGCCCCGATGGAGGGCAAGGAAACCCGCTTCGGCACCACCGGCTCGGTGCTGTGGACAGTGACTACTACCTC
TGCCTCCAACGGTTCGGTCAATGCCATGCACGACAGCCTCAACCCGCTGACCGGCATGGTGGCGATGGTCAACATGATGG
TCGGTGAGGTGATCTTTGGCGGCGTCGGTGCAGGGCTGTACGGCATGCTGTTGTTCGTATTGATCGCGGTGTTCCTGGCC
GGGCTGATGATCGGCCGCACCCCGGAATACCTGGGCAAGAAACTGCAGGCCCGCGAGGTGCAGTTGCTGGTGGCGACCCT
GCTGGTGATGCCGGTCGGCGTGTTGGTGCTCGGCGCCATTGCCGCCAGCCTGCCAGGCCCGGCAGGTGCGGTCAGCAACC
CGGGTGCGCATGGTTTCAGCCAGCTGCTGTATGCCTATACGTCGGGCACGGCCAACAACGGCTCGGCCTTTGCCGGCTTT
GGTGCCAACACGGTGTACCACAACCTGATGATCGGCCTGGCCATGCTCATCGGCCGCTTCGGCTACATCCTGCCGGTACT
GGCGCTGGCCGGCAGCCTGGCTGCGAAGAAAAGCGCGCCCCAGGGGCTTAACAGCTTCCCCACCCATGGCCCGCTGTTCA
CCAGCCTGCTGCTGGTCACCATCCTGCTGGTCGGTGGCCTGACCTTCCTGCCGACCCTGGCCCTTGGGCCGATCGCCGAA
CATTTGAGTCTGGGTTTTTGA

Protein sequence :
MAMHSYDFALLLAFFAIVLLPAPWLGRFYFKVMEGQRTWLSPVLGPVEQACYRLAGVGTSQEQNWQQYTLALLAFNLAGF
LLLFAVLLLQGYLPFNPQHLPGQEWSLAFNTAVSFVTNTNWQAYSGEASVSYLSQMLGLTVQNFVSAATGLAVLVALCRG
IARRSATTLGNFWVDMTRATLYGLLPLCLLLALLLVWQGVPQTLADYAHAVTLQGTEQTIPLGPAASQIAIKQLGTNGGG
FFGVNSAHPFENPTAWSNLFEVASIILIPVALVFTFGHYVKDLRQSRAILACMLALFLIGGSTALWSEYQPNPALESAQV
QQSAPMEGKETRFGTTGSVLWTVTTTSASNGSVNAMHDSLNPLTGMVAMVNMMVGEVIFGGVGAGLYGMLLFVLIAVFLA
GLMIGRTPEYLGKKLQAREVQLLVATLLVMPVGVLVLGAIAASLPGPAGAVSNPGAHGFSQLLYAYTSGTANNGSAFAGF
GANTVYHNLMIGLAMLIGRFGYILPVLALAGSLAAKKSAPQGLNSFPTHGPLFTSLLLVTILLVGGLTFLPTLALGPIAE
HLSLGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 3e-65 48
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 5e-65 48
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-55 45
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-55 45
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-55 45
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-55 45
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-55 45
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 1e-56 45