Gene Information

Name : PPS_3558 (PPS_3558)
Accession : YP_004702981.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4005660 - 4006355 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCAGTCCGCCACTCTCCTGGTCATCGACGATGAACCGCAGATCCGCAAGTTCCTGCGCATAAGCCTGGCCTCGCA
AGGCTACAAGGTGCTCGAGGCCGCCACCGGCGCGGAAGGGTTGGCCCAGGCGGCGCTGGGCAAGCCGGACCTGGTGGTAC
TCGACCTGGGCCTGCCGGACATGGACGGCCAGCAGGTACTGCGTGATCTGCGCGAATGGAGCGCGGTGCCGGTGCTGGTG
TTGTCGGTGCGCGCCAGTGAAGTGCAGAAGGTCGATGCGCTGGATGGTGGAGCCAACGACTATGTGACCAAGCCGTTCGG
CATCCAGGAGTTCCTGGCGCGGGTGCGCGCCTTGCTGCGCCAGGTGCCGCAGGCCGGTGGCTCGGAAGTGGCGGCCAGCT
TTGGGCCGCTGATGGTGGACTTTGCCTTTCGCCGGGTGACCCTGGATGGCGTGGAGGTGGCGCTGACCCGCAAGGAGTAT
GCGCTGCTGGCGCAACTGGCCGGGCACCCGGGGCGGGTGATTACCCAGCAGCAACTGCTCAAGGATATCTGGGGGCCTAC
CCATGTGGATGACACCCATTACCTGCGGATCGTGGTCGGGCATCTGCGGCAGAAGCTGGGCGATGACCCCACGGCGCCGC
GGTTCATCATCACCGAGCCAGGGGTGGGGTACAGGTTGGTGGCGCCGACCATGTAA

Protein sequence :
MSQSATLLVIDDEPQIRKFLRISLASQGYKVLEAATGAEGLAQAALGKPDLVVLDLGLPDMDGQQVLRDLREWSAVPVLV
LSVRASEVQKVDALDGGANDYVTKPFGIQEFLARVRALLRQVPQAGGSEVAASFGPLMVDFAFRRVTLDGVEVALTRKEY
ALLAQLAGHPGRVITQQQLLKDIWGPTHVDDTHYLRIVVGHLRQKLGDDPTAPRFIITEPGVGYRLVAPTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-28 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_3558 YP_004702981.1 two component transcriptional regulator VFG1390 Protein 2e-27 41