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Name : PPS_3547 (PPS_3547) Accession : YP_004702972.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 3991242 - 3992852 bp Length : 1611 bp Strand : + Note : - DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTGCGCGACCTGGCGGTGGAGTTCGTCACCGGGGACCAGGCCCACCGCGTTGTGAA CGGCATCAGCTTCGACATCCGCAAGGGTGAGACGCTGGCACTGGTGGGCGAGAGTGGCTCGGGCAAATCGGTTACCGCGC ACTCGCTCCTGCGCCTGCTGCCCTACCCCCTGGCCCGCCACCCCAGCGGCAGCATCCGCTACGAGGGCAAGGACCTGCTG CAGCAGAACGAGAAGACCATGCAGCGCATTCGCGGCAACCGCATTGCAATGATCTTCCAGGAGCCGATGACCTCGCTGAA CCCGTTGCACTGCATCGAGAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACCGGCAAGGAGGCCACGGCGC GCACCCTGGAGCTGTTGGAGATGGTCGGCATTCCCGAGCCACGCAAGCGCCTGAAGGCCTTGCCCCACGAGCTGTCGGGC GGGCAGCGCCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCCGAACTGCTGATTGCGGATGAGCCGACCACGGC GCTGGACGTGACCGTGCAGTTGAAGATTCTCGAACTGCTCAAGGAACTGCAGGCGCGTCTGGGCATGGCCCTGCTGCTGA TCAGCCATGACCTGAACCTGGTGCGACGCATCGCCCACCGTGTGTGCGTGATGCAGCACGGGCAGATTGTCGAGCAGGCC GAATGCGCCAAGCTGTTCAGCGCACCGCAGCACCACTACACGCAGATGCTGATCAATGCCGAACCCAGCGGGCAGCCGGC GCACAACCCGGTGGGCGCGCCATTGCTGGAGGTGGATGACCTCAAGGTGTGGTTCCCGATCAAGAAGGGCCTGCTACGGC GCACGGTCGACCATGTGAAGGCGGTTGACGGGGTCAACTTCAGCTTGCCGCAAGGGCAGACGCTGGGGATTGTCGGCGAG TCCGGGTCGGGCAAGTCGACTTTGGGTTTGGCGATCTTGCGGCTGATCTCCAGCCAGGGCGGCATTCGCTTTCATGGGCA GGATCTGGAAGGGCTGAACCAGAAGGCCGTGCGCCCGTTGCGCCGTGAAATGCAGGTGGTGTTCCAGGACCCGTTCGGCA GCCTGAGCCCGCGCATGTGCGTGGAGGACATTGTCGGCGAAGGGTTGCGCATTCACCGCATCGGTACGGCGCAGGAACAG GAAGCAGCGATTATTGCGGCCTTGGAGGAAGTGGGGCTGGATCCGCGCACGCGGCATCGCTATCCGCACGAGTTTTCCGG TGGGCAGCGCCAGCGCATTGCCATTGCCCGAGCGTTGGTATTGAAGCCGGCGCTGATCCTGCTGGATGAACCTACGTCGG CGCTGGACCGCACGGTGCAGCGGCAGGTAGTGGAATTGCTGCGCAATCTGCAGCAGAAATACAACCTGACCTACCTGTTC ATCAGCCATGACCTGGCGGTGGTCAAGGCGTTGAGCCACCAGTTGATGGTGATCAAGCATGGGCATGTGGTGGAACAAGG GGATGCGCAGGCGATCTTCCATGCGCCGCAGCATCCGTATACCCGGCAGTTGCTGGAGGCGGCGTTCTTGGAAGTGGATG CGGCTAGTTAG Protein sequence : MSEQNLIEVRDLAVEFVTGDQAHRVVNGISFDIRKGETLALVGESGSGKSVTAHSLLRLLPYPLARHPSGSIRYEGKDLL QQNEKTMQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLEMVGIPEPRKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQHGQIVEQA ECAKLFSAPQHHYTQMLINAEPSGQPAHNPVGAPLLEVDDLKVWFPIKKGLLRRTVDHVKAVDGVNFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQDLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVEDIVGEGLRIHRIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF ISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVDAAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-94 | 42 |
