Gene Information

Name : PPS_3478 (PPS_3478)
Accession : YP_004702905.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : putative short-chain type regulator
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3919644 - 3920393 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
ATGCTGTTAACAGGAAAATTTGCCGTGATCACTGGCGCGGCCTCTGCCCGCGGCATCGGCCGCGCAACAGCCCAGGCGTT
TGCCGCTCAGGGCGCCAAAGTCGCGATCCTGGACCTGGACGCCTCCGCCGCGACCGAGGCTGCCGCTTCACTGGGCGAAG
GCCACCTCGGCGTGGCTGCCAACGTTGCCGATGAAGCACAAGTGCGTGATGCCATCGCTCAAGTGCTCGCGCAATTCGGT
CGGATCGACGTGCTGGTAAACAACGCCGGTATCACTCAACCGGTGAAAACCCTGGAAATCACAGGGGCTGACTATGACCG
GATTCTCAACGTGAACCTGCGTGGCACCTTGCTGATGTCCCAGGCGGTGATCCCAACCATGCGGGCGCAACGCGCCGGCA
GCATCATCTGCATGTCATCTGTGTCTGCCCAGCGTGGTGGCGGCATCTTCGGTGGCCCTCACTACAGCGCGGCGAAGGCT
GGCGTGCTTGGATTGGGCAAGGCGATGGCCCGCGAGCTGGGGCCGGACAATATTCGCGTCAACTCGATCACGCCAGGCCT
GATTCACACTGACATCACCGGTGGCCTCATGCAGGATGAGCGCCGTCACGCCATCATCGAAGGCATCCCCTTGGGCCGTC
TGGGCGAGGCGCGCGATGTCGCCAATGCAGCTTTGTTCCTGGCCAGTGACCTGTCCAGCTACCTGACGGGCATTACCCTG
GATGTCAACGGCGGGATGCTGATCCACTGA

Protein sequence : 
MLLTGKFAVITGAASARGIGRATAQAFAAQGAKVAILDLDASAATEAAASLGEGHLGVAANVADEAQVRDAIAQVLAQFG
RIDVLVNNAGITQPVKTLEITGADYDRILNVNLRGTLLMSQAVIPTMRAQRAGSIICMSSVSAQRGGGIFGGPHYSAAKA
GVLGLGKAMARELGPDNIRVNSITPGLIHTDITGGLMQDERRHAIIEGIPLGRLGEARDVANAALFLASDLSSYLTGITL
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-77 84
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-76 83
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-76 83
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 9e-77 83
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 9e-77 83