Gene Information

Name : PPS_3390 (PPS_3390)
Accession : YP_004702817.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 3802399 - 3803064 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGCAGTGGTTCAGGCGGGTCATGAAATTGGTATCCATGGCTATAGCCATGAGAACCCGATCGCGATGACGCCAGA
GCAAGAAGAGATCGTCCTGGACAAGTCGATAGAAGTCATCACCCAGCTTTCAGGCAAACGGCCTACTGGCTATGTAGCGC
CATGGTGGGAATTCAGCAATGTCACCAATGAGTTGCTTCTGAAAAAGGGTATCAAGTATGACCACAGCTTGATGCACAAC
GACTTCCATCCTTACTACGTTCGGGTGAAAGATAGCTGGAGCAAGATTGATTACAGCCAACACCCTGATATCTGGATGAA
ACCGCTGGTACGGGGTGAAGAGACCGACTTGGTTGAAATTCCAGCTAACTGGTACCTTGATGACCTTCCTCCGATGATGT
TCATCAAGAAGTCTCCTAACAGCCACGGCTTTGTAAATCCACGCCATTTGGAAGAGATGTGGCGTGATCAATTTGACTGG
GTTTATCGTGAAAATGACTACGCGGTATTCCCCATCACAATTCACCCTGATGTTTCTGGTCGACCTCAAGTACTGCTCAT
GCTTGAGCGCTTTATTGAGCACATGAAAAGTCATGAAGGCGTGAAGTTCGTCACTATGGACGAAATCGCTGACGACTTTA
TCCGGCGCCAACCGCGTAAGCGTTGA

Protein sequence :
MKAVVQAGHEIGIHGYSHENPIAMTPEQEEIVLDKSIEVITQLSGKRPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHN
DFHPYYVRVKDSWSKIDYSQHPDIWMKPLVRGEETDLVEIPANWYLDDLPPMMFIKKSPNSHGFVNPRHLEEMWRDQFDW
VYRENDYAVFPITIHPDVSGRPQVLLMLERFIEHMKSHEGVKFVTMDEIADDFIRRQPRKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 3e-90 83