Gene Information

Name : PPS_3081 (PPS_3081)
Accession : YP_004702510.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 3466923 - 3467414 bp
Length : 492 bp
Strand : -
Note : -

DNA sequence : 
GTGACTCTCAAAGGCAACCCGGTTCAGGTCAACGGCGAGCTGCCGAAAGCCGGCGCCCAGGCTCCGGCTTTCTCCCTGGT
CGGTGAAGGTCTGGCTGACAAGTCGCTGAAAGACTTCGCCGGCAAGCGCAAGGTGCTGAACATCTTCCCGAGCGTCGACA
CCCCGACCTGCGCAACCTCCGTGCGCAAGTTCAACGCCCAGGCCAACGATGTGGCCAACACCGTGGTGCTGTGCATCTCC
GCCGACCTGCCGTTCGCTCAGGCACGCTTCTGCGGCGCCGAAGGCCTGGACAACGTGAAGAACCTGTCGACCCTGCGTGG
CCGCGAGTTCCTCGAAAACTACGGCGTGGCCATCGCCGATGGCCCGCTGGCCGGCCTGGCTGCCCGTGCCGTGGTGGTGC
TGGACGAAAACGACAAGGTGCTGCACAGCGAGCTGGTTGGCGAAATCGCTGATGAGCCGAACTACGACGCAGCTCTGGCT
GTGCTGAAGTAA

Protein sequence : 
MTLKGNPVQVNGELPKAGAQAPAFSLVGEGLADKSLKDFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVANTVVLCIS
ADLPFAQARFCGAEGLDNVKNLSTLRGREFLENYGVAIADGPLAGLAARAVVVLDENDKVLHSELVGEIADEPNYDAALA
VLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-30 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-30 49
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 7e-30 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 5e-30 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_3081 YP_004702510.1 redoxin domain-containing protein VFG0087 Protein 2e-30 49