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Name : PPS_0288 (PPS_0288) Accession : YP_004699753.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : choline ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 332724 - 333902 bp Length : 1179 bp Strand : - Note : - DNA sequence : ATGAGCATCATTCGTTTCGAAGACGTCGACGTCATCTTCTCCAACAAGCCGCGCGAAGCGCTGGCGCTGCTCGACCAAGG CCAGACCCGCGAGCAGATTCTCAAGCAGACCGGCCTGGTGGTGGGTGTCGAGAAGGCCAACCTGGATATCCAGAAGGGCG AGATCTGCGTGCTGATGGGCCTGTCCGGCTCGGGCAAGTCGAGTTTGCTGCGCTGCATCAACGGCCTCAACACCGTCAGC CGCGGCAAGCTGTTCGTCGAGCACGAAGGCAAGCACATCGATATTGCCCACTGCACCCCGGCCGAACTGAAGATGATGCG CACCAAGCGCATTGCCATGGTGTTCCAGAAATTCGCCCTGATGCCCTGGCTGACGGTGCGCGAGAACATCAGCTTTGGCC TGGAAATGCAGGGCCGCCCCGAGAAGGAACGGCGCAAGCTGGTAGACGAGAAGCTCGAACTGGTGGGCCTGACCCAGTGG CGCAACAAGAAGCCGGACGAACTGTCTGGCGGCATGCAGCAGCGTGTGGGCCTGGCCCGGGCGCTGGCGATGGATGCCGA CATCCTGCTGATGGACGAACCGTTCTCGGCACTGGACCCGCTGATCCGCCAAGGGCTGCAGGACGAGTTGCTTGGCCTGC AGGCCAAGCTGAGCAAGACCATCGTGTTCGTCAGCCACGACCTGGACGAGGCACTGAAACTGGGTAGCCGCATCGCCATC ATGAAGGACGGGCGGATCATTCAGTACAGCAAGCCGGAAGAGATCGTGCTCAACCCGGCCGACGAGTATGTGCGTACCTT TGTTGCCCATACCAACCCACTGAACGTGCTGTGCGGGCGCAGCCTGATGCGCAGCCTGGACAACTGCAAGCGGGTGAACG GTTCGGTGTGCCTAGACCCCGGCATCGACTCGTGGCTGGACCTTGGCGAAGGCGGCTCGATCAAGCGCGCACGCCAGGGG CAGAACGGGCTTGACCTGCAAAACTGGGCACCAGGGCAGGATGTGGAGCTGCTGGGCCGCCGCCCAACGTTGGTAAATGC CGATATCGGCATGCGCGAGGCGCTGCAGATTCGTTATCAGACCGGCAACAAGCTGGTGTTGCAGGATAACGACAAGGTGG TGGGGATACTTGGGGATACCGAGCTTTATCACGCATTGCTCGGCAAGAACCACGGCTGA Protein sequence : MSIIRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDIQKGEICVLMGLSGSGKSSLLRCINGLNTVS RGKLFVEHEGKHIDIAHCTPAELKMMRTKRIAMVFQKFALMPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQW RNKKPDELSGGMQQRVGLARALAMDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGSRIAI MKDGRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVLCGRSLMRSLDNCKRVNGSVCLDPGIDSWLDLGEGGSIKRARQG QNGLDLQNWAPGQDVELLGRRPTLVNADIGMREALQIRYQTGNKLVLQDNDKVVGILGDTELYHALLGKNHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 2e-57 | 42 |
