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Name : PPS_2841 (PPS_2841) Accession : YP_004702272.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Virulence Product : type VI secretion ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3158956 - 3161541 bp Length : 2586 bp Strand : + Note : - DNA sequence : GTGAACCTGAAGTCTCTGTTCGCCAAGCTCAACGAAACCAGCCGCACGGCCACGGAAAGCGCGGCGGCCCTGTGCCTGTC GGAGCACCATTACGACGTGGAGGTGGAGCACCTGTTGCTGCAGTTGCTCGACAACAGCGACAGCGACCTGGCGCCGATCC TGCGCCACTACGAAGTAGTCGCCGAGCGCCTGCAGGCGCAGCTGGTCACGGCCCTGGGCACCTTCAAGAAAGGTAATACC CGCACCCCGGCGCTGTCGCCGCACATCACCCGCATGATCGAGCAGGCCTGGCTGCTGGCGTCGATCGAATACGGCGTCGG CCAGGTGCGCAGCGCTCACCTGCTGCAGGCCCTGCTCGATGATGCCGAACTGCGTCGCGTGGTGATCGCCTCGGCGCCGG AGCTGGAGAAAATCAACGCCGATGACCTGCGCCTGAACCTTGCCGCGCTTGTAGAAGGCAGCGCCGAGTCCCGGCAGGCC AGCCCTGCGGCGCCAGTGAACAGTGCGACCAAGGCCGGCGGCAAGACCCCGGCGTTGGACCAGTACACGGTCAACCTCAC CCAGAGCGCCCGCGAAGGCCGCATCGACCCGGTGCTGGGCCGCGAGTTCGAAGTAAGGCAGATGGTCGACATCCTCACCC GTCGCCGCCAGAACAACCCGATCCTCACCGGCGAAGCCGGGGTCGGCAAAACCGCCGTGGTCGAAGGCCTGGCCCTGCGC ATCGCCCAAGGTGACGTGCCGGCGGTGCTCAAGGATGTGGCCCTGCACACCCTCGACCTGGGCCTGCTGCAGGCCGGCGC CGGCGTCAAGGGCGAGTTCGAGAACCGCCTCAAGGCAGTGATCGAAGAGGTCAAACGCAGCCTGCACCCGATCATCCTGT TCATCGACGAAGCCCACACCCTGATCGGTTCCGGTGGCCAGGCCGGGCAGAACGATGCCGCCAACCTGCTCAAGCCGGCC CTTGCCCGTGGCGAGCTGCGCACCATCGCCGCCACTACCTGGGCCGAATACAAGAAGTACTTCGAGAAGGACGCCGCCCT CGCCCGCCGCTTCCAGGTGGTCAAGGTGGAGGAACCCGACGAAGACAAGGCCATCCACATGCTGCGCGGCCTGCTCGGCA AGATGCGCGAACACCACAAGGTAGCGGTGATGGACGAAGCGCTGGTGCAGGCCGTGCGCCTGTCCAACCGCTACATCACC GGCCGCCAGCTGCCCGACAAGGCGGTCAGCGTGCTCGACACCGCCTGCGCACGCATTGCCCTGGCGCAATCGTCGCAACC TGGCGCCCTGGAGGACTGCCGCCGCCAGATCGACAACCTGCAGGCCGAAATCGCCGTGCTCGGCCACGAAGCCGGCAAAG GCCACGACCACACTCGCCGCCTGGGCGAGCTGCAGGCTGCCCTGCAGGCCGAGCAGCAGCGGGAGCAGCAGCTGAACACG CAGTGGCAACAGGAGCTGGAACTGGTCGAACAGCTCAAGGCGCTGGACGCCGCCAGCGAGGCCGATGCCAAGCAGCTCAA CGCCCTGCGTGCCGAACTGGCCCGCGTGCAAGGCGACCAGCCCCTGGTCCATGCCCTGGTCGACAGCGGCGCCATCGCCC AGGTCATCAGCGGCTGGACCGGTATCCCGCTGGGCAAGATGCTGCGTGACGAGATCGACACCGTGCAGCGCCTGCCGGCC CTGCTTGGTGAGCGCGTGCTGGGCCAGGACCACGCCCTGCACGAGATCGGCAAGCGCATCAAGATTTCCCGCGCACGCAT GGAAGACCCGAACAAACCGATCGGTGTGTTCCTGCTGCTCGGCCCCAGCGGCGTCGGCAAGACCGAAACCGCGCTGGCCC TGGCCGATACCCTGTACGGCGGTGAACGCAACCTCATCACCATCAACATGTCCGAGTACCAGGAAGCCCACACCGTTTCG AGCCTCAAGGGCTCGCCTCCCGGCTATGTCGGCTATGGCGAAGGCGGCGTGCTGACCGAGGCGGTGCGCCGCAAGCCGTA CAGCGTGGTGTTGCTCGACGAGGTGGAAAAAGCCCACCCCGACGTGCTCGAACTGTTCTTCCAGGTATTCGACAAGGGCG TGCTGGACGATGGCGAAGGCCGCGAGATCAATTTCCGCAACACGGTGATCATCCTCACCTCCAATACCGGTACCGAGCGC ATCATGCAGACCTGCCTGAACGCCACCGAGCTACCGACGCCCGCAGCGATCGTCGAAGACCTGCGTGAGCAGCTCAACCA TGTGTTCAAGCCGGCCTTCCTCGGCCGCCTGAGCATCGTGCCGTTCTACCCGGTGCAGGACCAGATCCTCGAGCGCATCG TCGCCCTCAAGCTCGAACGCATCGCCAAGCGCTTCGCCCGCAACCACCAGGCCGAGCTCAGCTACGACCAGGCGTTGGTC AAGGCCATCGCCGCGCGCTGCACCGAGGTCGACAGCGGTGCGCGCAACATCGACAACATCCTGTCCCAGACCCTGATGCC CGAGCTCGCCCAGCGCGTGCTCGAGCGCATGGCCCAGGACACGCCGATCCAGCGTCTTGCGATCGAGCTGGGCAGCGATG GCGATTTCGCCTATCGCGTGGCCTGA Protein sequence : MNLKSLFAKLNETSRTATESAAALCLSEHHYDVEVEHLLLQLLDNSDSDLAPILRHYEVVAERLQAQLVTALGTFKKGNT RTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAELRRVVIASAPELEKINADDLRLNLAALVEGSAESRQA SPAAPVNSATKAGGKTPALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALR IAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHTLIGSGGQAGQNDAANLLKPA LARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYIT GRQLPDKAVSVLDTACARIALAQSSQPGALEDCRRQIDNLQAEIAVLGHEAGKGHDHTRRLGELQAALQAEQQREQQLNT QWQQELELVEQLKALDAASEADAKQLNALRAELARVQGDQPLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPA LLGERVLGQDHALHEIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVS SLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTSNTGTER IMQTCLNATELPTPAAIVEDLREQLNHVFKPAFLGRLSIVPFYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALV KAIAARCTEVDSGARNIDNILSQTLMPELAQRVLERMAQDTPIQRLAIELGSDGDFAYRVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-166 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPS_2841 | YP_004702272.1 | type VI secretion ATPase | VFG2084 | Protein | 1e-149 | 46 |
| PPS_2841 | YP_004702272.1 | type VI secretion ATPase | VFG0079 | Protein | 3e-106 | 41 |
