|
Name : PPS_2837 (PPS_2837) Accession : YP_004702268.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Virulence Product : EvpB family type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3517 EC number : - Position : 3154094 - 3155596 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGACCGACAAGCAAACCGCACCGCAACAGGCCGGCGACCTGGTCGAAGTGGAAAACTTCGCGCCACAGGCATCGTTGCT CGACAGCATCATTTCGCAAAGCCGCGTGGCCCGCTCCGACACCGAGCGCAACCGCACCCGCGACCTGATTGGCGAACTGG TGAACCAGGTGCTCGAGGGCGAGATGACCCCGAGCAAGGACCTGATCGCCGTGCTCGATTCGCGTATCGCCGAAATCGAC GCGATGCTTTCCGAGCAGATGAACGAAATCATGCACGCCCGTGAGTTCCAGCAGCTGGAAGCCTCCTGGCGCGGCCTGAA ATACCAGGTAGACCAGACCGAGACCAGCACCACGCTGAAGATCCACCTGCTCAATGCCTCGAAGAAAGACCTGGTACGCG ACCTGAAGGCCGCCAGCGAATTCGACCAGAGCGCACTGTTCAAGAAGGTCTACGAAGAAGAGTACGGCACCTTCGGTGGC GCGCCTTTCGGCATGCTGATCGGTGACTACGAGTTCAACCGCAACCCCGAAGACATGTACCTGCTGGAGGAGATCTCGCA CGTCGCCGCGGCCGCCCATGCCCCGTTCATTTCGGCCGCCTCCCCCGAGCTGTTCGGCTGGGACTCGTTCACCGAAATGT CCGGCCCGCGTGACCTGGCAAAGATCTTCGACACCGTCGAATACGCCAAGTGGAAGTCGTTCCGCGCCTCGGAAGACTCG CGCTACGTCGGTCTCACCCTGCCGCACGTGCTCGGTCGCCTGCCGTATGGCCCCGATACCACCCCGGTGGAGGAATTCAA CTTCGTCGAAAGCGTCGATGGCCGCGACCACAACAAGTACCTGTGGATGAACGCTGCCTACGCCCTCGGCACCCGCGTTA CCGATGCCTTCGCCCGCTACGGCTGGTGCGTGGCCATCCGCGGCGTGGAAGGTGGCGGCCTGGTCGAAGGTTTGCCAACC CATACCTTCAAGACCGACGACGGCGAAATCGCCCTCAAGTGCCCGACCGAAATCGCCATCACCGACCGCCGCGAAAAAGA GCTGTCGGACCTGGGCTTCATCCCTCTGGTGCACTGCAAGGGCACCGACTATGCCGCGTTCTTCGGCACCCAGTCGGCGC AGAAGCAGAAGCAGTACAACACTGACATTGCCAACGCCAACGCGCGCCTGTCGGCCCAGCTGCAGTACATCTTCGCCACT TCGCGCATCGCCCACTACATGAAGGCCATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGATGTCGAGCGCTT CCTCAACCAATGGCTGGCCAGCTACGTGCTGCTCGACGACACCGCCAGCCAGGAAGCCAAGGCCAAGTTCCCGCTGCGCG AAGCCCGCGCCGAGGTGTTCGAAGTGCCGGGCAAGCCAGGTGTGTACAAGGCCGTGACCTACCTGCGCCCGCACTACCAA CTGGATGAGCTGACCGCTTCGCTGCGCCTGGTTGCCGAGCTGCCACAGGGCGCGCGCGGCTGA Protein sequence : MTDKQTAPQQAGDLVEVENFAPQASLLDSIISQSRVARSDTERNRTRDLIGELVNQVLEGEMTPSKDLIAVLDSRIAEID AMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLKIHLLNASKKDLVRDLKAASEFDQSALFKKVYEEEYGTFGG APFGMLIGDYEFNRNPEDMYLLEEISHVAAAAHAPFISAASPELFGWDSFTEMSGPRDLAKIFDTVEYAKWKSFRASEDS RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFARYGWCVAIRGVEGGGLVEGLPT HTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKGTDYAAFFGTQSAQKQKQYNTDIANANARLSAQLQYIFAT SRIAHYMKAIMRDKIGSFASRMDVERFLNQWLASYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ LDELTASLRLVAELPQGARG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 6e-85 | 42 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 5e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPS_2837 | YP_004702268.1 | EvpB family type VI secretion protein | VFG2070 | Protein | 8e-108 | 52 |
| PPS_2837 | YP_004702268.1 | EvpB family type VI secretion protein | VFG2475 | Protein | 8e-88 | 42 |
| PPS_2837 | YP_004702268.1 | EvpB family type VI secretion protein | VFG2093 | Protein | 4e-87 | 42 |
