Gene Information

Name : PPS_2836 (PPS_2836)
Accession : YP_004702267.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3153504 - 3154079 bp
Length : 576 bp
Strand : +
Note : -

DNA sequence : 
TTGTTTCGCAGCGAATTGCTCGCACTGGAGAACACGATGGCGAAGAAGGAAAGCACTCAGCACAAACTCGACCGCGTTCG
CGCGCCTCGGGTCCATATCACCTACGACGTGGACATCGGCGATGCCATCGAGAAAAAGGAGCTGCCCTTCGTCGTCGGCG
TACTGGGCGACTTTTCCGGCAACCCGCTGGAGCCGCTGCCCAAACTCAAGGACCGCAAGTTCGTCTACATCGACCGCGAC
AACTTCAACGGCGTGCTCAAGGGCATCAAGCCGCGCCTGACCTACCGCGTCGACAACACCCTGGCCAAGAACGGCACCCA
GCTGGGCGTGGAACTGAACTTCAACAGCCTCGAAGACTTCGAGCCACAGAACGTGGTCAAGCAGGTCGAACCGCTGCGCA
AACTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGTAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATG
GACGTGCTGCAGAACACCGAGAAGCTCAAGACCCTGGGCAAGGAATTCGGCCGTGAAGCCGAAGTGAAAGACCCATCCAG
CAGCGATCGCGCCTGA

Protein sequence : 
MFRSELLALENTMAKKESTQHKLDRVRAPRVHITYDVDIGDAIEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFVYIDRD
NFNGVLKGIKPRLTYRVDNTLAKNGTQLGVELNFNSLEDFEPQNVVKQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLM
DVLQNTEKLKTLGKEFGREAEVKDPSSSDRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-30 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_2836 YP_004702267.1 type VI secretion protein VFG2069 Protein 4e-31 42