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Name : PPS_0238 (PPS_0238) Accession : YP_004699703.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 277003 - 279327 bp Length : 2325 bp Strand : - Note : - DNA sequence : ATGGACAGCATCAACAGCCGTATCGCCGAGGAACTGGGCGTACGCCCCCAGCAGGTCGAGGCGGCCGTGGGCCTGTTGGA CGAAGGCTCGACCGTGCCCTTCATCGCCCGCTACCGCAAGGAAGTGACCGGTAGCCTGGACGACACCCAGCTGCGCCATC TGGAAGAGCGCCTGCGCTACCTGCGCGAACTCGACGAGCGCCGTGCCAGCATCCTGGCCAGCATCGAGGAGCAGGGCAAG CTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGATACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCA GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGAGCTGGCCGACTGCCTGTTCAACAACCCAGACC TCGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGACAAGGGCGTGGCCGACGTCAAGGCCGCGCTGGAAGGCGCC AAGTACATCCTCATGGAGCGCTTCGCCGAAGACGCCGCCCTGCTCGACAAGCTGCGCAGCTTCCTCAAGCAGGAGTCGGT GCTCAGCGCCCGCGTCGTGCCTGGCAAGGAAGAGGAAGGCGCCAAGTTCCGCGACTACTTCGCCCATGACGAACTGCTGC GCAACGCCCCGTCGCACCGCGCCCTGGCAATTTTCCGCGGGCGTAACGAAGGCGTGCTGAGCGCCTCGCTGAAAGTCGGC GAAGAACTGCCCGGCACCCTGCACCCGTGCGAACTGATGATCGGCAACCACGTCGGCATCGAGAACCGCAACCGCCCGGC CGACAAGTGGCTGGGCGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACACCCACCTGGAAACCGACCTGTTCGGCG AGCTGCGCGACAACGCCGAAGGCGAGGCGATCAATGTGTTCGCCCACAACCTGCACGACCTGCTGCTGGCCGCCCCGGCC GGCCCGCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGTACCGGCTGCAAGATCGCTGTGGTCGATGCCACAGGCAAGTT GCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGATTGGGACCGCACCATTTCGATCATGGCTGCGCTGTGCG CCAAGCACTCGGTGGAGCTGATCGCCATCGGTAACGGCACCGCCAGCCGCGAAAGCGACAAGCTGGTGGCGGAGCTGGTC AAGAAGTACCCAGCGCTGAAGATCACCAAGATCATGGTTTCCGAGGCCGGCGCTTCGGTGTATTCCGCATCGGAACTGGC CGCCCGCGAATTCCCGGACCTGGACGTGTCGATCCGTGGCGCCGTGTCGATTGCCCGCCGCCTGCAGGACCCGCTGGCCG AGCTGGTGAAGATCGACCCGAAATCCATCGGTGTCGGCCAGTACCAGCATGACGTGTCTCAACTGAAACTGGCGCGCGGC CTGGACGCCGTGGTCGAGGACTGCGTGAACGCCGTGGGCGTGGACGTCAACACCGCCTCGGTGGCCCTGCTGACGCGCAT CTCCGGCCTTAACGCTACCCTGGCGCAGAACATCGTCGCCCACCGCGATGCCAACGGCCCGTTCGCCACTCGCGCGGCAC TGAAAAAGGTCAGCCGCCTGGGTGAGAAAACCTTTGAACAAGCCGCCGGCTTCCTGCGTGTGATGAACGGCGACAACCCG CTGGATGCCTCTGCGGTGCACCCCGAGGCCTACCCGCTGGTGCAACGGATTGCCGCCGATACCGGCCGTGACATCCGCTC GCTGATCGGTGACAGCAGCTTCCTCAAGCGTCTGGACCCGAAGAAATTTACCGATGAAACCTTCGGCCTGCCGACCGTCA CCGACATCCTGCAAGAACTGGACAAGCCTGGCCGCGACCCACGCCCCGAATTCAAGACCGCCACCTTCCAGGACGGCGTC GAAGACCTCAAGGACCTGGAACCGGGCATGATCCTCGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGA CATCGGCGTGCACCAGGACGGCCTGGTGCACATTTCGGCGCTGTCGGAGAAGTTCATCAAGGACCCGCGTGAAGCGGTCA AGGCCGGCGACGTGGTCAAGGTCAAGGTCATGGAAGTGGACATCCCGCGCAAGCGTGTCGGCCTGTCCATGCGCATGAGC GACACCCCTGGCGAGAAGGTCGATGGCAACCGCGGCGGTAACCGTGGCAATGGCGGCAACCGCCAGCAGCAGGCGCCGCG CCAGCGCGAAACCGCCACCGCTGCACCGGCCAACAACGCCATGGCAGCCCTGTTCGCCAACGCCAAGCAGCTGAAGAAGA AGTGA Protein sequence : MDSINSRIAEELGVRPQQVEAAVGLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRASILASIEEQGK LTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADCLFNNPDLAPESEAARFVNADKGVADVKAALEGA KYILMERFAEDAALLDKLRSFLKQESVLSARVVPGKEEEGAKFRDYFAHDELLRNAPSHRALAIFRGRNEGVLSASLKVG EELPGTLHPCELMIGNHVGIENRNRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAEGEAINVFAHNLHDLLLAAPA GPRATLGFDPGLRTGCKIAVVDATGKLLDHTTVYPHAPKNDWDRTISIMAALCAKHSVELIAIGNGTASRESDKLVAELV KKYPALKITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNP LDASAVHPEAYPLVQRIAADTGRDIRSLIGDSSFLKRLDPKKFTDETFGLPTVTDILQELDKPGRDPRPEFKTATFQDGV EDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS DTPGEKVDGNRGGNRGNGGNRQQQAPRQRETATAAPANNAMAALFANAKQLKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 63 |
