Gene Information

Name : PPS_2344 (PPS_2344)
Accession : YP_004701785.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2639388 - 2640194 bp
Length : 807 bp
Strand : -
Note : -

DNA sequence :
ATGATGGGTGTCTTGATCCTGATTCTGGTGTCGGTGGCCGGGTGGTGTTCAGCCGCAGGCGCCGTCGAAGTCAAATACTG
GGACCGCTTGCCGCTGGCAGTGCCGTTGACGGTGGGTCAGGAACGTATCCTGATGCTGGATGAGGATGTCCGCGTCGGAT
TGCCCGGTGCGATTACCAATAAGCTGCGTGTGCAATCGGTTGGCGGGACGGTGTACCTGCGTGCGTCGGAAGCCATCCCC
CCGACCCGACTGCAGCTGCAGTCGGTAAAGTCAGGCGACATCATCCTGGTCGACATTGAAGCGCTCCAGGGCAGCGAGAC
GCTGGAGCCGGTCAAGATCGTGGCTCAGGCCCAGGCACCAGACGTGGAAACCGCGAAGGATGCAGCACCGGCAGCGACGC
CGGTACCGGTGGTGCTGACCCGCTTCGCGGCCCAGAACCTGTATGCGCCGCTGCGCACCGTGGCGCCCTTGCCCGGGGTG
CGTCTGGTCCCGCTGGGCGAGTCTTCTGGATTCAGCACGCTCCTGCCGACCGAGCACGTCTCCATCAAGGGACTTGCCGC
CTGGCGGCTGGGTAATTATTGGGTGACGGCGGTGAAGATCGTCAACCGTGGGTCGGCCAAGGTCACACTGGACCCGCGTC
ACCTGCAGGCCACGCTGTACGCCGCTACCTTCCAGCACGAGTACCTGGGGCACGCCGGCACACCTGAAGACACCACCGTG
GCGTACCTCGTCACCCGCGGCGGCGACCTGAGGCACGCGCTGCTGTTGCCACCGCCAGCGCCGGAGGCTGCCGATCATGA
AAGCTAA

Protein sequence :
MMGVLILILVSVAGWCSAAGAVEVKYWDRLPLAVPLTVGQERILMLDEDVRVGLPGAITNKLRVQSVGGTVYLRASEAIP
PTRLQLQSVKSGDIILVDIEALQGSETLEPVKIVAQAQAPDVETAKDAAPAATPVPVVLTRFAAQNLYAPLRTVAPLPGV
RLVPLGESSGFSTLLPTEHVSIKGLAAWRLGNYWVTAVKIVNRGSAKVTLDPRHLQATLYAATFQHEYLGHAGTPEDTTV
AYLVTRGGDLRHALLLPPPAPEAADHES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-48 55
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 7e-42 52
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 7e-43 48
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 9e-43 48
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 9e-43 48
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 9e-43 48
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 4e-49 47
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 2e-42 47
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-44 46
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 9e-44 46
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 6e-45 46
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 7e-44 45
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-39 41