Gene Information

Name : PPS_2227 (PPS_2227)
Accession : YP_004701668.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2502072 - 2503556 bp
Length : 1485 bp
Strand : +
Note : -

DNA sequence : 
GTGTCCTTCAAACCACGCTACGGCAACTTCATCAACGGTGAATTCGTGCCGCCGCTGGGCGGCCAGTACTTCACCAACAG
CTCGCCGGTCAATGGCCAGCCGATTGCCGAGTTCCCGCGCTCCGGCGCCCAGGACATCGAGCAGGCCCTGGACGCCGCGC
ATGCCGCTGCCGAGGCCTGGGGCAAGACCTCGGTGCAGGACCGCGCCCTGGTACTGCTGAAGATCGCCGACCGCATCGAA
CAGAATCTCGAAGTACTGGCCGTTACCGAGAGCTGGGACAACGGCAAGGCCGTGCGCGAAACCCTCAACGCCGACGTGCC
GCTGGCGGCGGACCACTTCCGCTACTTCGCCGGCTGCATCCGTGCCCAGGAAGGCGGCGCCGCCGAAATCAACGAGGGCA
CCGTGGCCTACCACATCCACGAGCCATTGGGCGTGGTCGGGCAGATCATTCCATGGAACTTCCCGCTGCTGATGGCCGCC
TGGAAACTCGCCCCGGCGCTGGCAGCCGGCAACTGCGTGGTGCTCAAACCGGCGGAGCAGACGCCGTTGTCGATCACCAT
TTTCGCCGAGCTGATCGCCGACCTGCTGCCAGCAGGCGTGCTGAACATCGTCCAGGGCTTTGGTCGCGAAGCCGGTGAGG
CACTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGTTCCACCCCGGTGGGCTCGCACATCATGAAGTGCGCG
GCCGAGAACATCATCCCGTCCACCGTCGAACTGGGTGGCAAGTCGCCGAACATCTTCTTCGAAGACATCATGCAGGCCGA
GCCCGCGTTCATCGAAAAGGCAGCCGAAGGCCTGGTGCTGGCGTTCTTCAACCAGGGCGAAGTGTGCACCTGCCCGTCGC
GGGCGCTGATCCAGGAATCGATCTACGAGCCGTTCATGGCCGAGGTGATGAAGAAGATCGCCAAGATCACCCGTGGCAAC
CCGCTGGACACCGCGACCATGGTCGGCGCCCAGGCCTCGGAGCAGCAATACGACAAGATTCTTTCCTACTTGCAGATTGC
CCGGGAGGAGGGCGCGCAGCTGCTCACCGGTGGCGCTGCCGAGCGGCTCGACGGCGACCTGGCCAGCGGTTACTACATCC
AGCCGACCTTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAGGAGGAGATCTTCGGCCCGGTGGTGGGCGTGACCACC
TTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGCGAGTTTGGCCTGGGCGCGGGGCTGTGGACCCGTGACAT
CAACCGTGCCTACCGCATGGGCCGCGGGATCAAGGCCGGGCGCGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATG
CCGCGTTCGGTGGCTACAAGAAGTCCGGGGTGGGCCGCGAGACGCACAAGATGATGCTTGATCACTACCAGCAGACCAAG
AACCTGCTGGTGAGCTACGACATCAACCCGTTGGGCTTCTTCTAA

Protein sequence : 
MSFKPRYGNFINGEFVPPLGGQYFTNSSPVNGQPIAEFPRSGAQDIEQALDAAHAAAEAWGKTSVQDRALVLLKIADRIE
QNLEVLAVTESWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQIIPWNFPLLMAA
WKLAPALAAGNCVVLKPAEQTPLSITIFAELIADLLPAGVLNIVQGFGREAGEALATSKRIAKIAFTGSTPVGSHIMKCA
AENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALIQESIYEPFMAEVMKKIAKITRGN
PLDTATMVGAQASEQQYDKILSYLQIAREEGAQLLTGGAAERLDGDLASGYYIQPTLLKGNNKMRVFQEEIFGPVVGVTT
FKDEAEALAIANDSEFGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRETHKMMLDHYQQTK
NLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-149 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-153 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-153 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-153 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-152 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_2227 YP_004701668.1 aldehyde dehydrogenase VFG0082 Protein 1e-149 66