Gene Information

Name : PPS_2007 (PPS_2007)
Accession : YP_004701452.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2245717 - 2246733 bp
Length : 1017 bp
Strand : -
Note : -

DNA sequence :
ATGATGCGCCTGCTACCCTGCATCGCCGTTGCCCTGGCCGCCCTGTTGGCGGCCCTGCTGGCCGGCACCGCCATCGGCGA
AACCAACCTGTCGCCCGGCGTGGTCGGCCAGGTACTGGCCAACCACCTGTGGCAGGCCGGCTACCCGGTCGACCCGATCG
ACGCCGGCATCGTCTGGAACTACCGCCTGCCCCGCACCCTGGTTGCCGCGGCCTGCGGCGCCGGCCTGGCCACCTGCGGC
GTGATCCTCCAGGCACTGTTGCGCAACCCGTTGGCCGAGCCTTACCTGCTGGGGCTGTCCGCCGGCGCCTCGACCGGTGC
GGTGCTGGTGGGCCTGCTGGGCTTCGGCAGCCTGGCGCTGAGCATGTCCGGCGGCGCGTTCATCGGTGCCCTGGCAGCGT
TCGCTTTGGTACTGTTGCTGGCCCGGGCAGCCGGCCCCAGCAGCAACAATGCCCAGGTGATCCTTGCCGGGATCGCCGGC
TCGCAACTGTTCAACGCCCTTACCGCCTTCCTCATCACCATGTCGGCCACCGCCGAGCAGGCGCGCGGCATCCTGTTCTG
GCTGCTGGGTAACCTCAGTGGCGTACGTTGGCCTTCGGTGTGGCTGGCCGTGCCAGTTGTACTGTTCGGGCTGTTGGTGT
GCCTGTGGCATCGCCGTGCCTTGGATGCCTTCACCTTCGGTGCCGACTCGGCGGCGTCGCTGGGCATCCCGGTGCGGCGT
ACCCAGTTGCTGCTGATCAGCTGCGCGGCGCTGGTGACCGCCGTGATGGTGTCCATCGTCGGCGCCATCGGTTTTGTCGG
GCTGGTGATCCCCCATGCGCTGCGCCTGCTGCTCGGCCCCGGGCACAGCCGCCTGCTGCCCGCCAGCGCACTGGGCGGAG
CACTGTTCCTGATTGCCGCCGACATCCTGTCGCGCATCTTGATCCCTGGCCAGGTGATCCCCGTGGGCGTAGTCACAGCG
CTGCTCGGCGCACCGGTCTTCGCGCTGATCCTGGTCAGCCGCCGGGGGCGCCCATGA

Protein sequence :
MMRLLPCIAVALAALLAALLAGTAIGETNLSPGVVGQVLANHLWQAGYPVDPIDAGIVWNYRLPRTLVAAACGAGLATCG
VILQALLRNPLAEPYLLGLSAGASTGAVLVGLLGFGSLALSMSGGAFIGALAAFALVLLLARAAGPSSNNAQVILAGIAG
SQLFNALTAFLITMSATAEQARGILFWLLGNLSGVRWPSVWLAVPVVLFGLLVCLWHRRALDAFTFGADSAASLGIPVRR
TQLLLISCAALVTAVMVSIVGAIGFVGLVIPHALRLLLGPGHSRLLPASALGGALFLIAADILSRILIPGQVIPVGVVTA
LLGAPVFALILVSRRGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1769 YP_005134303.1 ferrichrome transport system permease protein fhuB Virulence Not named Protein 4e-27 41
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-30 41
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-30 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-30 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 1e-30 41