Gene Information

Name : PPS_2006 (PPS_2006)
Accession : YP_004701451.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2244932 - 2245720 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence : 
ATGACGGTCATGACGGCGCTACAGATGGCCCCCTTGAGTTGCCAGAACCTGGGGCTGCAACTGGCCAGCAATACCGTGCT
CAGCGATATCGAACTGAGCGTTGTCGCCGGTGAAACCCTGGGCGTCGTCGGCCCCAACGGTTCCGGCAAGTCCTCGCTGC
TGAAGGTGCTGGCCGGGCTGCGCAAGCCAGGCAACGGCAGCGTGCAGTTGCTGGGCGAACCGCTGGCACAGTTGCCCCGC
CGCCATGTCGCCCAGGCCTTGGCGCTGGTCGAACAGCAGGCCGACACCCTCGATGCGATCAGCGTGTTCGATGCCGTTGC
CCTGGGCCGCACCCCCTGGCTGTCGGCGCTGGCGCCGTTCTCCCGGGAAGACCGCGCGATCGTCGAGCAGGCCCTGGCCG
ACCTCGACGCTTTGCACCTGCGCGCACGCCTTTGGGGGTCGCTGTCCGGGGGCGAGCGCCAGCGGGTGCACATCGCCCGA
GCCCTGGCACAGCGGCCGCAGGTGCTGCTGCTGGACGAGCCGACCAACCACCTGGATATCCAGCACCAGCTGAGCCTGTT
GCAACAGGTGCAGGCCTTGCCGGTGACCACCCTGGTGGCCCTGCACGACCTCAATCAGGCGCTCACCTGCGACCGCGTAG
CGGTGCTCGACAAAGGCCGACTGGTCGCCCTCGGCAAACCGCTCGAGGTGCTCACCCCCGAGCGCCTGCTGAACACTTTC
GGCGTGCATGCCCACTACCTCATCGACCCCTTCGACGGCGCGCACATCTTGCGTTTGCGCGCCCCCTGA

Protein sequence : 
MTVMTALQMAPLSCQNLGLQLASNTVLSDIELSVVAGETLGVVGPNGSGKSSLLKVLAGLRKPGNGSVQLLGEPLAQLPR
RHVAQALALVEQQADTLDAISVFDAVALGRTPWLSALAPFSREDRAIVEQALADLDALHLRARLWGSLSGGERQRVHIAR
ALAQRPQVLLLDEPTNHLDIQHQLSLLQQVQALPVTTLVALHDLNQALTCDRVAVLDKGRLVALGKPLEVLTPERLLNTF
GVHAHYLIDPFDGAHILRLRAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 6e-25 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_2006 YP_004701451.1 iron ABC transporter ATP-binding protein BAC0164 Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_2006 YP_004701451.1 iron ABC transporter ATP-binding protein VFG1042 Protein 9e-28 41