Gene Information

Name : PPS_1900 (PPS_1900)
Accession : YP_004701349.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2128181 - 2128864 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGGGCCCCAGCATTCTCGTTGCGCAGAACCTTAGCAAAGTGGTCCCCAGCGCGGAAGGTGACCTGACCATCCTGCACGC
CCTGTCCCTCGACCTGGCCCAAGGCGACAGCCTGGCAATCGTCGGCGCCTCGGGTTCGGGCAAGTCGACCCTGCTTGGCC
TGCTCGCCGGCCTCGACCAGCCCAGTGCCGGCAAGGTCATCCTTGCTGGCCACGACCTGGGGCCGCTGGATGAAGACCAG
CGCGCGCGGGTGCGCGCCGAACATGTGGGTTTCGTGTTCCAGTCGTTCCAGTTGCTCGACAGCCTCAATGCCCTGGAGAA
CGTCATGCTGCCGCTGGAGCTGGATGGCCGCCGCGATGCCCGCGAACACGCGCGCACCCTGCTCGAACGGGTCGGTCTGG
GCAAGCGCCTGAGCCACACTCCGCGCCAGCTTTCGGGCGGCGAACAACAACGGGTGGCCATCGCCCGCGCCTTCGCCGCG
CAACCGGCAGTGCTGTTTGCCGACGAACCCACCGGCAATCTCGACAGCCACACCGGCGAGCGCATCAGCGACTTGCTGTT
CGAACTGAACAAGGAGCGCGGCACCACCCTGGTGCTGGTTACCCATGACGAACGCCTGGCCCGGCGCTGCCGCCGCCAGA
TTCGCCTGGATGCGGGCCGCCTGGTGGCCCCGGCGGAGGCCTGA

Protein sequence : 
MGPSILVAQNLSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDQPSAGKVILAGHDLGPLDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREHARTLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAA
QPAVLFADEPTGNLDSHTGERISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-22 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_1900 YP_004701349.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-29 50
PPS_1900 YP_004701349.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-32 45