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Name : PPS_1675 (PPS_1675) Accession : YP_004701128.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 1875487 - 1877169 bp Length : 1683 bp Strand : - Note : - DNA sequence : TTGGCTAACCCAGATCGAAGTGATGGCCTGTTGCCACAGGTCAAGCACATTAATTATTCATTCAATAAAACCAGCGGCTT GCCGATACCAGTCGAAAGCCCTGCGGACTATCAACCCATGCGTAACAACCAGCCGATTACCCAGAGAGAACGGACTTTCC CTGCCCAGCAGCGGTTGATCTCCACCACCAATGCCAAAGGTGTGATCACTTACTGCAACGATGCCTTCGTCGAGATCAGT GGTTTCACCCGCGAAGAACTGACCGGTGCCCCGCATAACCTGGTGCGTCACCCCGATGTGCCGCCAGCGGTGTTTGCCCA CATGTGGCAAACCCTCAAGCAGGGCCAGCCGTGGATGGGCATCGTCAAGAACCGCTGCAAGTCCGGCGACCATTACTGGG TCAACGCCTATGTCACGCCGATCTTCGACAACAACCAGGTGGTCGGCTTCGAATCGGTGCGGGTCAAGCCCACCGCCGAG CAGGTCCGCCGCGCCGAGGCGCTGTACCAGCGCATCAACCAGGGCAAGCCGCCGGTACCGCGCCGGGACAAGTGGCTACC GGTGCTGCAGGACTGGTTGCCGTTCATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGCCATTCCTGGG GCTTCGCCCTGGCTGCCGGGCTTTCCGTACCGCTGGGCCTGCTGGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTG CTGCGCCTGGCCGAGCAAACCACCTCCGACCCGCTGATCGCGCAGATGTACACCGACAGCCGGGGCGTGCAGGCGCGCCT GGAAATGGCCATGCTCAGCCAGGACGCGCGCATGAAAACCTGCCTGACCCGCCTGCAGGACAGCGCCGAACACCTCAGCG AACAGGCGCGCCAGTCTGACGCGCTTGCGCACAAGAGCTCTTCGGGCCTGGAGCGCCAACGGGTGGAGACCGAGCAGGTT GCCGCTGCAGTCAACCAGATGGCCGCCACCACCCAGGAAGTGGCCAACCACGTGCAGCGCACCGCCGATGCCACCCAGGA AGCCAACCGCCTGACCAGCCAGGGCCGGCAGATTGCCGGTGAAACCCGCGAGGCCATCGAGCGCCTGTCGGCGGCGGTGG GCGAAACCGGCCAGACGGTGACGCAACTGGCCAAGGACAGCGACGAGATTGGTGGCGTGGTCGATGTGATCAAGGGCATC GCCGACCAGACCAACCTGCTGGCGCTGAACGCGGCCATCGAAGCGGCACGTGCCGGTGAAATGGGCCGAGGCTTTGCCGT GGTGGCCGACGAAGTGCGCCAGCTGGCCCAGCGCACTGCCGAATCCACCGGGCAGATCCACGGCCTGATCGCCAAGCTGC AACAAACCGCCAGCAATGCCGTACTGACCATGGAAACCGGCCATCGCCAGGCGCAGGAAGGCGTCGACCGTGTGATGCAG GCCGACGAGGCGCTGGTGGGTATCAGTGAAGCGGTGGCCAACATCACCGACATGGCTACCCAGATTGCTGCAGCGACCGA AGAGCAGACTGCAGTGGCGGACGAGATCAGCCGCAACATCAGCACCATCGCCGACCTGGCCGACCAGACTGCCGAACAGG CCCAGCACTCGGCGCTGCTCAGCGAAGAGCTGACCAGTACGGCGGGTACCCAGTACTCGCTGGTGGAGCGGTTCAACCGC TAA Protein sequence : MANPDRSDGLLPQVKHINYSFNKTSGLPIPVESPADYQPMRNNQPITQRERTFPAQQRLISTTNAKGVITYCNDAFVEIS GFTREELTGAPHNLVRHPDVPPAVFAHMWQTLKQGQPWMGIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTAE QVRRAEALYQRINQGKPPVPRRDKWLPVLQDWLPFILISQVGFLIGNWLGHSWGFALAAGLSVPLGLLGLSWQQRGLKRL LRLAEQTTSDPLIAQMYTDSRGVQARLEMAMLSQDARMKTCLTRLQDSAEHLSEQARQSDALAHKSSSGLERQRVETEQV AAAVNQMAATTQEVANHVQRTADATQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGI ADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQ ADEALVGISEAVANITDMATQIAAATEEQTAVADEISRNISTIADLADQTAEQAQHSALLSEELTSTAGTQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 8e-68 | 41 |
