Gene Information

Name : PPS_0159 (PPS_0159)
Accession : YP_004699628.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : two component LytTR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 190164 - 190907 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence :
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGGCCGTGAACGCCTCAGCCGGCTGCTCGGCGAACTGGAGGGTTATAC
CGTGCTGGAGCCTAGCGCCACCAACGGCGATGAGGCCCTGACGCTGATCGAAAGCCTCAAGCCCGATGTGGTCCTGCTGG
ACATCGGCATGCCAGGCCTGGATGGCCTGCAGGTGGCCGCTCGCCTGTGCGAGCGCGAGGCACCGCCGGCGGTAGTGTTT
TGCACCGGCGACGATGAATACGGTGCCGAGGCCTTCAAGGACAGCACCCTCAGCCATGTGACCAAACCCTTCCACGCCCA
GGCGCTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGTGCCCAGTTGGCGGCGCTCACCCGGCCGGCCAATGAAG
GTGGCGGCCCACGCAGCCACATCAGTGCCCGCACGCGCAAAGGCATCGAGCTGATCCCTTTGCCCCAGGTGATCTACTTC
ATTGCCGACCACAAGTACGTGACCTTGCGCCACGAGGCCGGGGAAGTGCTGCTCGACGAGCCACTCAAGGCCCTGGAAGA
CGAGTTTGGCGAACGCTTCGTGCGTATCCACCGCAACGCGCTGGTTGCCCGTGAACGTATCGAACGCCTGCAGCGTACCC
CGCTGGGGCATTTTCAGCTGTACCTGAAGGGCCTGGACGGTGATGCCTTGACTGTCAGCCGGCGCCATGTGGCCGGTGTG
CGCAAGATGATGCAGACCCTCTGA

Protein sequence :
MNVLIVDDEPQGRERLSRLLGELEGYTVLEPSATNGDEALTLIESLKPDVVLLDIGMPGLDGLQVAARLCEREAPPAVVF
CTGDDEYGAEAFKDSTLSHVTKPFHAQALRDALRKAEKPNRAQLAALTRPANEGGGPRSHISARTRKGIELIPLPQVIYF
IADHKYVTLRHEAGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGV
RKMMQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-42 44
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_0159 YP_004699628.1 two component LytTR family transcriptional regulator VFG0119 Protein 5e-89 80